RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 ACO1P21399 889 aaKnown RBP6.1□□□□□ -1.43
PSEN1-211ENST00000554995 HIBADHP31937 336 aaKnown RBP6.1□□□□□ -1.43
PSEN1-211ENST00000554995 VAV2P52735 878 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 ATXN1P54253 815 aaKnown RBP6.1□□□□□ -1.43
PSEN1-211ENST00000554995 CASP6P55212 293 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 FAM189BP81408 668 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 TOMM20Q15388 145 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 ZNF484Q5JVG2 852 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 SP5Q6BEB4 398 aaPredicted RBP6.1□□□□□ -1.43
PSEN1-211ENST00000554995 ACAD10Q6JQN1 1059 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 RASGRP2Q7LDG7 609 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 SUPT20HQ8NEM7 779 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 FEZF2Q8TBJ5 459 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 KTI12Q96EK9 354 aaPredicted RBP6.1□□□□□ -1.43
PSEN1-211ENST00000554995 BOD1Q96IK1 185 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 BARD1Q99728 777 aaKnown RBP6.1□□□□□ -1.43
PSEN1-211ENST00000554995 CHCHD6Q9BRQ6 235 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 ALOXE3Q9BYJ1 711 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 GALNT9Q9HCQ5 603 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 INTS13Q9NVM9 706 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 RABGAP1Q9Y3P9 1069 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 NOX1Q9Y5S8 564 aa6.1□□□□□ -1.43
PSEN1-211ENST00000554995 LMTK3Q96Q04 1460 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 A0A087X0M5 115 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 LOC105369274A0A096LPK9 316 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 LOC102723532A0A0G2JNH3 316 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 A0A1B0GX30 115 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 A6NCN8 305 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 M0QYT0 321 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 TSPAN3O60637 253 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 NCR1O76036 304 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 TMEM225BP0DP42 221 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 FAM3BP58499 235 aaPredicted RBP6.09□□□□□ -1.43
PSEN1-211ENST00000554995 EIF4A1P60842 406 aaKnown RBP6.09□□□□□ -1.43
PSEN1-211ENST00000554995 DCAF7P61962 342 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 CRHR2Q13324 411 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 RRP1BQ14684 758 aaKnown RBP6.09□□□□□ -1.43
PSEN1-211ENST00000554995 SPDYE7PQ495Y7 208 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 SLC45A4Q5BKX6 768 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 ZNF569Q5MCW4 686 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 FAM90A2PQ658T7 463 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 CCDC144NLQ6NUI1 221 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 SYNE3Q6ZMZ3 975 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 KRBA2Q6ZNG9 492 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 OR4N4Q8N0Y3 316 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 GLG1Q92896 1179 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 REXO5Q96IC2 774 aaKnown RBP6.09□□□□□ -1.43
PSEN1-211ENST00000554995 C7orf26Q96N11 449 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 EIF3CQ99613 913 aaKnown RBP6.09□□□□□ -1.43
PSEN1-211ENST00000554995 ZNF768Q9H5H4 540 aaKnown RBP6.09□□□□□ -1.43
PSEN1-211ENST00000554995 ACAD9Q9H845 621 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 RMI1Q9H9A7 625 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 PLEKHA5Q9HAU0 1116 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 PLEKHA2Q9HB19 425 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 TRIM36Q9NQ86 728 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 TMEM74BQ9NUR3 256 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 NKX1-2Q9UD57 310 aaPredicted RBP6.09□□□□□ -1.43
PSEN1-211ENST00000554995 SLC45A1Q9Y2W3 748 aa6.09□□□□□ -1.43
PSEN1-211ENST00000554995 TRGV11A0A075B6L2 103 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 A0A1W2PPH5 198 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 SAC3D1A6NKF1 404 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 PATE3B3GLJ2 98 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 F5H0A9 414 aaPredicted RBP6.08□□□□□ -1.44
PSEN1-211ENST00000554995 KLK10O43240 276 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 RTN3O95197 1032 aaPredicted RBP6.08□□□□□ -1.44
PSEN1-211ENST00000554995 CPA1P15085 419 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 THBS4P35443 961 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 HNRNPMP52272 730 aaKnown RBP eCLIP6.08□□□□□ -1.44
PSEN1-211ENST00000554995 RNASELQ05823 741 aaKnown RBP6.08□□□□□ -1.44
PSEN1-211ENST00000554995 GALNT2Q10471 571 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 EIF2B5Q13144 721 aaKnown RBP6.08□□□□□ -1.44
PSEN1-211ENST00000554995 BFSP2Q13515 415 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 NFIXQ14938 502 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 TBRG1Q3YBR2 411 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 AASDHQ4L235 1098 aaPredicted RBP6.08□□□□□ -1.44
PSEN1-211ENST00000554995 WDR45BQ5MNZ6 344 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 ANO7Q6IWH7 933 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 GLB1LQ6UWU2 654 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 KRT27Q7Z3Y8 459 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 PDILTQ8N807 584 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 FAM71DQ8N9W8 422 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 TDRD7Q8NHU6 1098 aaKnown RBP6.08□□□□□ -1.44
PSEN1-211ENST00000554995 Q8TCH9 128 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 ADAMTS18Q8TE60 1221 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 OVCA2Q8WZ82 227 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 SSBP3Q9BWW4 388 aaPredicted RBP6.08□□□□□ -1.44
PSEN1-211ENST00000554995 GLOD4Q9HC38 313 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 AKIP1Q9NQ31 210 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 FBXO28Q9NVF7 368 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 TMLHEQ9NVH6 421 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 BAG5Q9UL15 447 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 HSF4Q9ULV5 492 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 CYP46A1Q9Y6A2 500 aa6.08□□□□□ -1.44
PSEN1-211ENST00000554995 GAGE12BA1L429 117 aa6.07□□□□□ -1.44
PSEN1-211ENST00000554995 A1L4Q6 167 aa6.07□□□□□ -1.44
PSEN1-211ENST00000554995 GAGE12HA6NDE8 117 aa6.07□□□□□ -1.44
PSEN1-211ENST00000554995 M0QZQ0 153 aa6.07□□□□□ -1.44
PSEN1-211ENST00000554995 RNASET2O00584 256 aaKnown RBP6.07□□□□□ -1.44
PSEN1-211ENST00000554995 HEXIM1O94992 359 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms