RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 WIPF3A6NGB9 483 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 TARM1B6A8C7 271 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 QSOX1O00391 747 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 HNRNPDLO14979 420 aaKnown RBP3.64□□□□□ -1.83
SCFD1-213ENST00000554776 ASNA1O43681 348 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 GYS1P13807 737 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 NTSR1P30989 418 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 HTR7P34969 479 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 PGDP52209 483 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 EEFSECP57772 596 aaKnown RBP3.64□□□□□ -1.83
SCFD1-213ENST00000554776 TFF2Q03403 129 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 TMTC4Q5T4D3 741 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 LIN54Q6MZP7 749 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 MZT2AQ6P582 158 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 TMED8Q6PL24 325 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-213ENST00000554776 KIAA0408Q6ZU52 694 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 PARS2Q7L3T8 475 aaKnown RBP3.64□□□□□ -1.83
SCFD1-213ENST00000554776 PTF1AQ7RTS3 328 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 SLC29A4Q7RTT9 530 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 ZNF804AQ7Z570 1209 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 CCDC28AQ8IWP9 274 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 METTL25Q8N6Q8 603 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 OR1N1Q8NGS0 311 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 HASPINQ8TF76 798 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 TRIM63Q969Q1 353 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 LTV1Q96GA3 475 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-213ENST00000554776 ZDHHC12Q96GR4 267 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 WDYHV1Q96HA8 205 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 FAM227BQ96M60 508 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 LENG8Q96PV6 779 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-213ENST00000554776 PRR25Q96S07 402 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 PRPF18Q99633 342 aaKnown RBP3.64□□□□□ -1.83
SCFD1-213ENST00000554776 PAGR1Q9BTK6 254 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 AGO4Q9HCK5 861 aaKnown RBP3.64□□□□□ -1.83
SCFD1-213ENST00000554776 ADARB2Q9NS39 739 aaKnown RBP3.64□□□□□ -1.83
SCFD1-213ENST00000554776 DNAJB11Q9UBS4 358 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 HPSEQ9Y251 543 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 FRMD4BQ9Y2L6 1034 aa3.64□□□□□ -1.83
SCFD1-213ENST00000554776 FNDC1Q4ZHG4 1894 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-213ENST00000554776 ARHGEF17Q96PE2 2063 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-213ENST00000554776 M0R3H8 397 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 IPO5O00410 1097 aaKnown RBP3.63□□□□□ -1.83
SCFD1-213ENST00000554776 SH3BP5O60239 455 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 JTBO76095 146 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 PRKCBP05771 671 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 NPSP0C0P6 89 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 VEGFAP15692 232 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-213ENST00000554776 ENGP17813 658 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 MST1P26927 711 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 RBL1P28749 1068 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 GKP32189 559 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 SERPINF1P36955 418 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 MAPK9P45984 424 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 GATMP50440 423 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 COPAP53621 1224 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 PDE1AP54750 535 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 E2F1Q01094 437 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 FHL3Q13643 280 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 PRKG1Q13976 671 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 MAPKAPK3Q16644 382 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.63□□□□□ -1.83
SCFD1-213ENST00000554776 SUMO4Q6EEV6 95 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 SULT6B1Q6IMI4 303 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 MBD3L2Q8NHZ7 208 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-213ENST00000554776 CYP2W1Q8TAV3 490 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 DPF1Q92782 380 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 CTHRC1Q96CG8 243 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 MACROD1Q9BQ69 325 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 EIF2AK1Q9BQI3 630 aaKnown RBP3.63□□□□□ -1.83
SCFD1-213ENST00000554776 INO80BQ9C086 356 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-213ENST00000554776 SLC25A32Q9H2D1 315 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 MLXIPQ9HAP2 919 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 TRIM36Q9NQ86 728 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 TM7SF3Q9NS93 570 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 C9orf78Q9NZ63 289 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-213ENST00000554776 ADAMTS5Q9UNA0 930 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 USP22Q9UPT9 525 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 COL15A1P39059 1388 aa3.63□□□□□ -1.83
SCFD1-213ENST00000554776 PCSK5Q92824 1860 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 MANSC4A6NHS7 340 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-213ENST00000554776 CGB1A6NKQ9 187 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 LINC01548A6NM66 108 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 SYT5O00445 386 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 FCHO1O14526 889 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 SPRY2O43597 315 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 COQ9O75208 318 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 PMPCBO75439 489 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 WDHD1O75717 1129 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-213ENST00000554776 AGR2O95994 175 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 PRKCGP05129 697 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 DLDP09622 509 aaKnown RBP3.62□□□□□ -1.83
SCFD1-213ENST00000554776 DHRS4L1P0CG22 281 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 SRGAP2BP0DMP2 458 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 ARP10275 920 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 IDEP14735 1019 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 EGR1P18146 543 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 SLC5A2P31639 672 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 MTHFSP49914 203 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 CYP4F2P78329 520 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 PSG6Q00889 435 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms