RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 EGFLAMQ63HQ2 1017 aa12.89□□□□□ -0.35
MTHFD1-207ENST00000554677 KLHDC10Q6PID8 442 aa12.89□□□□□ -0.35
MTHFD1-207ENST00000554677 Q6ZNB5 142 aa12.89□□□□□ -0.35
MTHFD1-207ENST00000554677 TOGARAM2Q6ZUX3 1019 aa12.89□□□□□ -0.35
MTHFD1-207ENST00000554677 NT5C1AQ9BXI3 368 aa12.89□□□□□ -0.35
MTHFD1-207ENST00000554677 CYP3A43Q9HB55 503 aa12.89□□□□□ -0.35
MTHFD1-207ENST00000554677 TMEM9BQ9NQ34 198 aa12.89□□□□□ -0.35
MTHFD1-207ENST00000554677 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.89□□□□□ -0.35
MTHFD1-207ENST00000554677 FBXO10Q9UK96 956 aa12.89□□□□□ -0.35
MTHFD1-207ENST00000554677 PILRBQ9UKJ0 227 aa12.89□□□□□ -0.35
MTHFD1-207ENST00000554677 MAPK8IP1Q9UQF2 711 aa12.89□□□□□ -0.35
MTHFD1-207ENST00000554677 USP3Q9Y6I4 520 aa12.89□□□□□ -0.35
MTHFD1-207ENST00000554677 DMXL2Q8TDJ6 3036 aa12.89□□□□□ -0.35
MTHFD1-207ENST00000554677 CKAP5Q14008 2032 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 MAP3K13O43283 966 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 CLSTN1O94985 981 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 TOP3BO95985 862 aaKnown RBP12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 KLKB1P03952 638 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 HSP90AA1P07900 732 aaKnown RBP12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 RARGP13631 454 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 TYRP14679 529 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 ITPKAP23677 461 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 NR2F2P24468 414 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 NTSR1P30989 418 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 SYKP43405 635 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 ENPEPQ07075 957 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 ZCWPW2Q504Y3 356 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 TRIM61Q5EBN2 209 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 PPP1R26Q5T8A7 1209 aaPredicted RBP12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 PEAR1Q5VY43 1037 aaPredicted RBP12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 KIAA1211LQ6NV74 962 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 SLC23A3Q6PIS1 610 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 TPGS1Q6ZTW0 290 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 ARMCX6Q7L4S7 300 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 SYT12Q8IV01 421 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 ZNF276Q8N554 614 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 SEMA4DQ92854 862 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 JAKMIP2Q96AA8 810 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 SPATA32Q96LK8 384 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 BBS2Q9BXC9 721 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 DUSP16Q9BY84 665 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 NACA2Q9H009 215 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 ZMYND15Q9H091 742 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 PNPLA8Q9NP80 782 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 DNAJC17Q9NVM6 304 aaKnown RBP12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 BCCIPQ9P287 314 aaKnown RBP eCLIP12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 PCDHA5Q9Y5H7 936 aa12.88□□□□□ -0.35
MTHFD1-207ENST00000554677 WDFY3Q8IZQ1 3526 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 NEDD8-MDP1E9PL57 170 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 STC2O76061 302 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 CEACAM1P13688 526 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 HOXB2P14652 356 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 CSRP1P21291 193 aaKnown RBP12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 PLA2G4AP47712 749 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 ADAM9Q13443 819 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 BYSLQ13895 437 aaKnown RBP12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 PREPLQ4J6C6 727 aaPredicted RBP12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 GRAMD4Q6IC98 578 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 INTS8Q75QN2 995 aaKnown RBP12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 CCDC186Q7Z3E2 898 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 TRMT11Q7Z4G4 463 aaKnown RBP12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 FAM186BQ8IYM0 893 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 PGBD3Q8N328 593 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 GUF1Q8N442 669 aaKnown RBP12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 DEFB119Q8N690 84 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 SPACA7Q96KW9 195 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 GABRG3Q99928 467 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 NIF3L1Q9GZT8 377 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 GOLPH3LQ9H4A5 285 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 CALCOCO1Q9P1Z2 691 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 WDR35Q9P2L0 1181 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 DNMT3LQ9UJW3 386 aa12.87□□□□□ -0.35
MTHFD1-207ENST00000554677 IGHV1OR15-9A0A0B4J2B8 117 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 WASH3PC4AMC7 463 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 ENGP17813 658 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 CD58P19256 250 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 NDUFV2P19404 249 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 PSMC2P35998 433 aaKnown RBP12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 UAP1L1Q3KQV9 507 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 LYSMD4Q5XG99 296 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 KRBA2Q6ZNG9 492 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 NUDT18Q6ZVK8 323 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 SLC41A1Q8IVJ1 513 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 IPO4Q8TEX9 1081 aaKnown RBP12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 ERLEC1Q96DZ1 483 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 XPO6Q96QU8 1125 aaKnown RBP12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 TMEM121BQ9BXQ6 578 aaPredicted RBP12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 NUSAP1Q9BXS6 441 aaKnown RBP12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 SLC6A17Q9H1V8 727 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 CAPN10Q9HC96 672 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 TMEM8AQ9HCN3 771 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 CD93Q9NPY3 652 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 FSCN3Q9NQT6 498 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 PLK2Q9NYY3 685 aa12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 ATXN2Q99700 1313 aaKnown RBP12.86□□□□□ -0.35
MTHFD1-207ENST00000554677 ZNF202O95125 648 aa12.85□□□□□ -0.35
MTHFD1-207ENST00000554677 KIF20AO95235 890 aa12.85□□□□□ -0.35
MTHFD1-207ENST00000554677 PENKP01210 267 aaPredicted RBP12.85□□□□□ -0.35
MTHFD1-207ENST00000554677 SPINK2P20155 84 aa12.85□□□□□ -0.35
MTHFD1-207ENST00000554677 GTF2H1P32780 548 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms