RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 RASSF2P50749 326 aa16.27■□□□□ 0.2
ARHGEF40-203ENST00000554514 SESN3P58005 492 aa16.27■□□□□ 0.2
ARHGEF40-203ENST00000554514 CRADDP78560 199 aa16.27■□□□□ 0.2
ARHGEF40-203ENST00000554514 FAM187BQ17R55 369 aa16.27■□□□□ 0.2
ARHGEF40-203ENST00000554514 TTC39BQ5VTQ0 682 aaPredicted RBP16.27■□□□□ 0.2
ARHGEF40-203ENST00000554514 CASC4Q6P4E1 433 aa16.27■□□□□ 0.2
ARHGEF40-203ENST00000554514 NDRG1Q92597 394 aaKnown RBP16.27■□□□□ 0.2
ARHGEF40-203ENST00000554514 EIF2AQ9BY44 585 aaKnown RBP16.27■□□□□ 0.2
ARHGEF40-203ENST00000554514 VRTNQ9H8Y1 702 aa16.27■□□□□ 0.2
ARHGEF40-203ENST00000554514 GEMIN8Q9NWZ8 242 aaKnown RBP16.27■□□□□ 0.2
ARHGEF40-203ENST00000554514 SLC17A6Q9P2U8 582 aa16.27■□□□□ 0.2
ARHGEF40-203ENST00000554514 A6NJR5 290 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 H3BRB1 525 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 CSH1P0DML2 217 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 CSH2P0DML3 217 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 MYL2P10916 166 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 SLC10A2Q12908 348 aaPredicted RBP16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 LAMC2Q13753 1193 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 PDK2Q15119 407 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 PARP6Q2NL67 630 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 ANKRD20A2Q5SQ80 823 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 ANKRD20A1Q5TYW2 823 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 ANKRD20A3Q5VUR7 823 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 TRIM68Q6AZZ1 485 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 UNC5BQ8IZJ1 945 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 PYROXD2Q8N2H3 581 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 NFKBIZQ9BYH8 718 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 TUT1Q9H6E5 874 aaKnown RBP16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 NRDE2Q9H7Z3 1164 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 ADARB2Q9NS39 739 aaKnown RBP16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 KLK14Q9P0G3 267 aa16.27■□□□□ 0.19
ARHGEF40-203ENST00000554514 SPDYE5A6NIY4 337 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 ASB14A6NK59 587 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 CXCL11O14625 94 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 AKAP5P24588 427 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 ETV4P43268 484 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 UNC5AQ6ZN44 842 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 DENND5BQ6ZUT9 1274 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 ALYREFQ86V81 257 aaKnown RBP16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 INPP5DQ92835 1189 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 KHSRPQ92945 711 aaKnown RBP eCLIP16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 MIPEPQ99797 713 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 SETD4Q9NVD3 440 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 C2CD2Q9Y426 696 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 KRT37O76014 449 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 SNRPAP09012 282 aaKnown RBP16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 TGM2P21980 687 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 PTPN4P29074 926 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 ERFP50548 548 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 TMPRSS15P98073 1019 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 TAPT1Q6NXT6 567 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 VPS52Q8N1B4 723 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 FAM167BQ9BTA0 163 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 MROH8Q9H579 483 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 DENND2DQ9H6A0 471 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 PLAC1Q9HBJ0 212 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 CITO14578 2027 aa16.26■□□□□ 0.19
ARHGEF40-203ENST00000554514 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 PEX11AO75192 247 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 ADORA2AP29274 412 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 PRKD1Q15139 912 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 GRIK4Q16099 956 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 CTC1Q2NKJ3 1217 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 RFX8Q6ZV50 586 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 CCDC185Q8N715 623 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 CDCA5Q96FF9 252 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 KCNK13Q9HB14 408 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 MYO18AQ92614 2054 aaKnown RBP16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 SLC15A5A6NIM6 579 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 DESP17661 470 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 AMPD1P23109 780 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 SLC18A2Q05940 514 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 ZNF618Q5T7W0 954 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 KCNT2Q6UVM3 1135 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 ZCCHC23Q6ZST2 131 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 CATSPER4Q7RTX7 472 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 CDHR5Q9HBB8 845 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 TMPRSS4Q9NRS4 437 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 SEPT10Q9P0V9 454 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 AP4E1Q9UPM8 1137 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 LMO2P25791 158 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 TAF11Q15544 211 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 CHI3L2Q15782 390 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 SOWAHAQ2M3V2 549 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 SLC9A4Q6AI14 798 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 EP400NLQ6ZTU2 488 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 SH2D5Q6ZV89 423 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 FAM131BQ86XD5 332 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 DEPDC1BQ8WUY9 529 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 C16orf70Q9BSU1 422 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 RNPEPL1Q9HAU8 725 aa16.25■□□□□ 0.19
ARHGEF40-203ENST00000554514 I3L4J1 428 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 APOEP02649 317 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 DHRS4L1P0CG22 281 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 TSHRP16473 764 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 ARID3BQ8IVW6 561 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 NDUFAF2Q8N183 169 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 LINC01465Q8N7H1 131 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 SLC35F5Q8WV83 523 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 FAM149B1Q96BN6 582 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms