RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 PRMT7Q9NVM4 692 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-212ENST00000554486 DMAC2Q9NW81 257 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 SIRT5Q9NXA8 310 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 SMG5Q9UPR3 1016 aaKnown RBP6.84□□□□□ -1.31
SCFD1-212ENST00000554486 TRAF3IP3Q9Y228 551 aa6.84□□□□□ -1.31
SCFD1-212ENST00000554486 NOC2LQ9Y3T9 749 aaKnown RBP6.84□□□□□ -1.31
SCFD1-212ENST00000554486 TRIP11Q15643 1979 aa6.84□□□□□ -1.32
SCFD1-212ENST00000554486 CNTNAP2Q9UHC6 1331 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 MYOCOSA0A1B0GUC4 107 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 A0A1W2PQJ5 194 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 CCDC66A2RUB6 948 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 PDXKO00764 312 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 KIAA0355O15063 1070 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 CLIC2O15247 247 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 OPA1O60313 960 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 NBNO60934 754 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 NR3C1P04150 777 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 CLTBP09497 229 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 ARF4P18085 180 aaPredicted RBP6.83□□□□□ -1.32
SCFD1-212ENST00000554486 NAT1P18440 290 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 PROZP22891 400 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 ITGB8P26012 769 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 CYP2C18P33260 490 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 MECP2P51608 486 aaKnown RBP6.83□□□□□ -1.32
SCFD1-212ENST00000554486 DLG4P78352 724 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 SRSF3P84103 164 aaKnown RBP6.83□□□□□ -1.32
SCFD1-212ENST00000554486 PRR5P85299 388 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 LRRC63Q05C16 580 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 BFSP2Q13515 415 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 PRPF4BQ13523 1007 aaKnown RBP6.83□□□□□ -1.32
SCFD1-212ENST00000554486 PCBP1Q15365 356 aaKnown RBP eCLIP6.83□□□□□ -1.32
SCFD1-212ENST00000554486 NFIL3Q16649 462 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 EDRF1Q3B7T1 1238 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 PLEKHN1Q494U1 663 aaPredicted RBP6.83□□□□□ -1.32
SCFD1-212ENST00000554486 SPATA1Q5VX52 437 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 FOXR2Q6PJQ5 311 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 LRRC55Q6ZSA7 311 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 TSHZ1Q6ZSZ6 1077 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 CATSPER4Q7RTX7 472 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 LUZP1Q86V48 1076 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 OSTM1Q86WC4 334 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 C12orf56Q8IXR9 622 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 AOPEPQ8N6M6 819 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 BICD1Q96G01 975 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 EEF2KMTQ96G04 330 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 CPB2Q96IY4 423 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 CBWD1Q9BRT8 395 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 KRTAP9-9Q9BYP9 154 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 KRTAP9-4Q9BYQ2 154 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 HSD3B7Q9H2F3 369 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 PDZD7Q9H5P4 517 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 SMURF1Q9HCE7 757 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 PTPRHQ9HD43 1115 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 SLC6A20Q9NP91 592 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 CD320Q9NPF0 282 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 ST3GAL5Q9UNP4 418 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 EXOC7Q9UPT5 735 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 TNFSF13BQ9Y275 285 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 STYXL1Q9Y6J8 313 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 SQORQ9Y6N5 450 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 CITO14578 2027 aa6.83□□□□□ -1.32
SCFD1-212ENST00000554486 CEP290O15078 2479 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 ANK1P16157 1881 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 A0A0B4J269 797 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 A0A1B0GUA9 196 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 BICDL2A1A5D9 508 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 ZNF561-AS1K7EIQ3 104 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 IKBKBO14920 756 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 HNRNPDLO14979 420 aaKnown RBP6.82□□□□□ -1.32
SCFD1-212ENST00000554486 CALUO43852 315 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-212ENST00000554486 FAM189A1O60320 539 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 MGEA5O60502 916 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 RPS6KA5O75582 802 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 TOM1L1O75674 476 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 ERLIN2O94905 339 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 CAVIN2O95810 425 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 JMJD7P0C870 316 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 MYCLP1P12525 358 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-212ENST00000554486 SFPQP23246 707 aaKnown RBP eCLIP6.82□□□□□ -1.32
SCFD1-212ENST00000554486 AXLP30530 894 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 CD52P31358 61 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 MAPKAPK2P49137 400 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 LIG4P49917 911 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 CCL23P55773 120 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 JAM2P57087 298 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 SNRPFP62306 86 aaKnown RBP6.82□□□□□ -1.32
SCFD1-212ENST00000554486 FKBP3Q00688 224 aaKnown RBP6.82□□□□□ -1.32
SCFD1-212ENST00000554486 MYL5Q02045 173 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 MCL1Q07820 350 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 SEPT7Q16181 437 aaKnown RBP6.82□□□□□ -1.32
SCFD1-212ENST00000554486 TCTN1Q2MV58 587 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 UBXN11Q5T124 520 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 ATF7IP2Q5U623 682 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 FSTL4Q6MZW2 842 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 ARMCX5Q6P1M9 558 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 CDR2LQ86X02 465 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-212ENST00000554486 RBM12BQ8IXT5 1001 aaKnown RBP6.82□□□□□ -1.32
SCFD1-212ENST00000554486 GOLGA5Q8TBA6 731 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 TMEM174Q8WUU8 243 aa6.82□□□□□ -1.32
SCFD1-212ENST00000554486 POMGNT1Q8WZA1 660 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms