RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 FMO5P49326 533 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PSEN1P49768 467 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 GOLGA8FQ08AF8 430 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 GOLGA8DPQ0D2H9 430 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 GOLGA7BQ2TAP0 167 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TPGS1Q6ZTW0 290 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PIGZQ86VD9 579 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 RASSF3Q86WH2 238 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ZNF276Q8N554 614 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ANKRD52Q8NB46 1076 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 NDRG1Q92597 394 aaKnown RBP12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 UBXN6Q9BZV1 441 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 SMOC1Q9H4F8 434 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 FAM124BQ9H5Z6 455 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 DNAJC17Q9NVM6 304 aaKnown RBP12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CLIC5Q9NZA1 410 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 HCN2Q9UL51 889 aa12.5□□□□□ -0.41
TRAPPC6B-204ENST00000554018 MAP1BP46821 2468 aaKnown RBP12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ASCC3Q8N3C0 2202 aaKnown RBP12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 NEDD8-MDP1E9PL57 170 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 BIN1O00499 593 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 STC2O76061 302 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 KLKB1P03952 638 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 HMBSP08397 361 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ZNF806P0C7X5 589 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 RALAP11233 206 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TYRP14679 529 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CD19P15391 556 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 GBP1P32455 592 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 EFEMP1Q12805 493 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 MORC3Q14149 939 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ELF2Q15723 593 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CCDC40Q4G0X9 1142 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 USP39Q53GS9 565 aaKnown RBP12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 RAB41Q5JT25 222 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 C10orf76Q5T2E6 689 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 GRAMD4Q6IC98 578 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TTI2Q6NXR4 508 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 Q6ZNB5 142 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TADA2BQ86TJ2 420 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 UBR7Q8N806 425 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TERB1Q8NA31 727 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 MDGA1Q8NFP4 955 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 NETO1Q8TDF5 533 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 NELFBQ8WX92 580 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 BHMTQ93088 406 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 P2RY11Q96G91 374 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CNOT6LQ96LI5 555 aaKnown RBP12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CEP63Q96MT8 703 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 RTKNQ9BST9 563 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 BBS2Q9BXC9 721 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 METTL14Q9HCE5 456 aaKnown RBP12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 WDR35Q9P2L0 1181 aa12.49□□□□□ -0.41
TRAPPC6B-204ENST00000554018 SLC30A4O14863 429 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CACNG3O60359 315 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ALDH1A2O94788 518 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 RHOBTB1O94844 696 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 BCKDHBP21953 392 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 MPLP40238 635 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TKTL1P51854 596 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 STX17P56962 302 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 SLC8A3P57103 927 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 YWHAGP61981 247 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 YWHAEP62258 255 aaKnown RBP12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CREB5Q02930 508 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PDE4CQ08493 712 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 HSF5Q4G112 596 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PREPLQ4J6C6 727 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 SGO2Q562F6 1265 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 EOGTQ5NDL2 527 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PLA2G2CQ5R387 149 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TOGARAM2Q6ZUX3 1019 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ZNF513Q8N8E2 541 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 OLIG1Q8TAK6 271 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 UBA3Q8TBC4 463 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 HMGB4Q8WW32 186 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 XPO6Q96QU8 1125 aaKnown RBP12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ULBP1Q9BZM6 244 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 RXFP3Q9NSD7 469 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PLK2Q9NYY3 685 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 MARK1Q9P0L2 795 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 RASAL2Q9UJF2 1139 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TSPAN16Q9UKR8 245 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CTNND2Q9UQB3 1225 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PCDHGA5Q9Y5G8 931 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ADAMTS9Q9P2N4 1935 aa12.48□□□□□ -0.41
TRAPPC6B-204ENST00000554018 FRYQ5TBA9 3013 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 KNL1Q8NG31 2342 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TCRBV21S2A2A0A5A6 115 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PRRT4C9JH25 899 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 XPO1O14980 1071 aaKnown RBP12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 FOXD2O60548 495 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ZBED1O96006 694 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CISD3P0C7P0 127 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 VDRP11473 427 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TBXAS1P24557 533 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CORO1AP31146 461 aaKnown RBP12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PPP1R2P41236 205 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 WASP42768 502 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 BCAT1P54687 386 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms