RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 BTG3Q14201 252 aaPredicted RBP3.61□□□□□ -1.83
SLIRP-202ENST00000553981 GRM4Q14833 912 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 PLCB4Q15147 1175 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 UBE2SQ16763 222 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 PTPROQ16827 1216 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 ASPRV1Q53RT3 343 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 TMEM177Q53S58 311 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 GPATCH4Q5T3I0 446 aaKnown RBP3.61□□□□□ -1.83
SLIRP-202ENST00000553981 C1QL3Q5VWW1 255 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 MBNL2Q5VZF2 373 aaKnown RBP3.61□□□□□ -1.83
SLIRP-202ENST00000553981 ANKRD54Q6NXT1 300 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 CC2D1AQ6P1N0 951 aaPredicted RBP3.61□□□□□ -1.83
SLIRP-202ENST00000553981 ABHD17CQ6PCB6 329 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 CWC27Q6UX04 472 aaKnown RBP3.61□□□□□ -1.83
SLIRP-202ENST00000553981 METTL7BQ6UX53 244 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 TMEM184AQ6ZMB5 413 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 MFSD6Q6ZSS7 791 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 FAM228AQ86W67 206 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 HOMER1Q86YM7 354 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 RAB11FIP4Q86YS3 637 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 SRBD1Q8N5C6 995 aaKnown RBP3.61□□□□□ -1.83
SLIRP-202ENST00000553981 OR5AN1Q8NGI8 311 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 GPR150Q8NGU9 434 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 SLC25A43Q8WUT9 341 aaPredicted RBP3.61□□□□□ -1.83
SLIRP-202ENST00000553981 ATOH1Q92858 354 aaPredicted RBP3.61□□□□□ -1.83
SLIRP-202ENST00000553981 P2RX5Q93086 422 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 RMDN1Q96DB5 314 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 ZNF668Q96K58 619 aaPredicted RBP3.61□□□□□ -1.83
SLIRP-202ENST00000553981 CASD1Q96PB1 797 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 TCF25Q9BQ70 676 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 KATNAL1Q9BW62 490 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 VN1R3Q9BXE9 311 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 LMAN2LQ9H0V9 348 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 MLXIPQ9HAP2 919 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 ERVK-5Q9HDB9 667 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 TRPS1Q9UHF7 1281 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 PADI3Q9ULW8 664 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 MRPL11Q9Y3B7 192 aaKnown RBP3.61□□□□□ -1.83
SLIRP-202ENST00000553981 NOC2LQ9Y3T9 749 aaKnown RBP3.61□□□□□ -1.83
SLIRP-202ENST00000553981 PCDHA1Q9Y5I3 950 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 UBIAD1Q9Y5Z9 338 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 WDR81Q562E7 1941 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 RAD50Q92878 1312 aa3.61□□□□□ -1.83
SLIRP-202ENST00000553981 IGKV6D-21A0A0A0MT36 114 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 TCRBV16S1A1N1A0A5B0 115 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 NT5C1B-RDH14C9J2C7 533 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 GCOM1H8Y6P7 765 aaPredicted RBP3.6□□□□□ -1.83
SLIRP-202ENST00000553981 GPR32O75388 356 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 CCNE2O96020 404 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 PARP1P09874 1014 aaKnown RBP3.6□□□□□ -1.83
SLIRP-202ENST00000553981 POLR2MP0CAP2 368 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 TGFB3P10600 412 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 GLULP15104 373 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 IBSPP21815 317 aaPredicted RBP3.6□□□□□ -1.83
SLIRP-202ENST00000553981 FGFR4P22455 802 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 CCND2P30279 289 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 HOXC13P31276 330 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 FAM189BP81408 668 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 MRPS6P82932 125 aaKnown RBP3.6□□□□□ -1.83
SLIRP-202ENST00000553981 SLC6A3Q01959 620 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 PPFIA1Q13136 1202 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 HNRNPA0Q13151 305 aaKnown RBP3.6□□□□□ -1.83
SLIRP-202ENST00000553981 ITGB3BPQ13352 177 aaPredicted RBP3.6□□□□□ -1.83
SLIRP-202ENST00000553981 DRP2Q13474 957 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 PTPN21Q16825 1174 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 GAGE13Q4V321 117 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 BRDTQ58F21 947 aaPredicted RBP3.6□□□□□ -1.83
SLIRP-202ENST00000553981 RABL3Q5HYI8 236 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 ZC3H12BQ5HYM0 836 aaKnown RBP3.6□□□□□ -1.83
SLIRP-202ENST00000553981 CLLU1OSQ5K130 101 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 FKBP15Q5T1M5 1219 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 PLPP4Q5VZY2 271 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 TSHZ1Q6ZSZ6 1077 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 HTR3DQ70Z44 454 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 RHOUQ7L0Q8 258 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 CLEC14AQ86T13 490 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 SKAP1Q86WV1 359 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 ELOA2Q8IYF1 753 aaPredicted RBP3.6□□□□□ -1.83
SLIRP-202ENST00000553981 CMTR2Q8IYT2 770 aaKnown RBP3.6□□□□□ -1.83
SLIRP-202ENST00000553981 MAML2Q8IZL2 1156 aaPredicted RBP3.6□□□□□ -1.83
SLIRP-202ENST00000553981 DCLK2Q8N568 766 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 LINC01465Q8N7H1 131 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 IGSF22Q8N9C0 903 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 COLGALT1Q8NBJ5 622 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 PLA2G15Q8NCC3 412 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 RSAD2Q8WXG1 361 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 AUTS2Q8WXX7 1259 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 RILPL2Q969X0 211 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 PGBD4Q96DM1 585 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 MNTQ99583 582 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 FAM49AQ9H0Q0 323 aaPredicted RBP3.6□□□□□ -1.83
SLIRP-202ENST00000553981 TYW1Q9NV66 732 aaKnown RBP3.6□□□□□ -1.83
SLIRP-202ENST00000553981 SIRPGQ9P1W8 387 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 CTNNA3Q9UI47 895 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 RALYQ9UKM9 306 aaKnown RBP3.6□□□□□ -1.83
SLIRP-202ENST00000553981 TRPV2Q9Y5S1 764 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 EMSYQ7Z589 1322 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 IGSF9BQ9UPX0 1349 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 DNAH14Q0VDD8 3507 aa3.6□□□□□ -1.83
SLIRP-202ENST00000553981 FANCMQ8IYD8 2048 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms