RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 E5RJQ4 531 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 SPECC1L-ADORA2AF8WAN1 911 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 PAPSS1O43252 624 aaPredicted RBP9.77□□□□□ -0.85
CHD8-206ENST00000553870 PNMA6AP0CW24 399 aaPredicted RBP9.77□□□□□ -0.85
CHD8-206ENST00000553870 AVPR2P30518 371 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 CTHP32929 405 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 SCNN1AP37088 669 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 PBX1P40424 430 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 YWHAZP63104 245 aaKnown RBP9.77□□□□□ -0.85
CHD8-206ENST00000553870 EFEMP1Q12805 493 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 NNTQ13423 1086 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 PPP1R2P3Q6NXS1 205 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 MAMSTRQ6ZN01 415 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 TPRG1Q6ZUI0 275 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 TOGARAM2Q6ZUX3 1019 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 NOP9Q86U38 636 aaKnown RBP9.77□□□□□ -0.85
CHD8-206ENST00000553870 ERICH1Q86X53 443 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 SYNPOQ8N3V7 929 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 ZNF397Q8NF99 534 aaPredicted RBP9.77□□□□□ -0.85
CHD8-206ENST00000553870 FLCNQ8NFG4 579 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 RIN3Q8TB24 985 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 FAM3CQ92520 227 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 NDRG1Q92597 394 aaKnown RBP9.77□□□□□ -0.85
CHD8-206ENST00000553870 SYN2Q92777 582 aaPredicted RBP9.77□□□□□ -0.85
CHD8-206ENST00000553870 AZIN2Q96A70 460 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 PLD4Q96BZ4 506 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 C18orf8Q96DM3 657 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 ZFYVE19Q96K21 471 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 CPXM1Q96SM3 734 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 IER2Q9BTL4 223 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 IRX2Q9BZI1 471 aaPredicted RBP9.77□□□□□ -0.85
CHD8-206ENST00000553870 LINC00597Q9H2U6 94 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 EBF3Q9H4W6 596 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 SYNCQ9H7C4 482 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 ECT2Q9H8V3 914 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 POPDC2Q9HBU9 364 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 LTB4R2Q9NPC1 389 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 HPS4Q9NQG7 708 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 GTSE1Q9NYZ3 720 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 AIPL1Q9NZN9 384 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 CYTH4Q9UIA0 394 aa9.77□□□□□ -0.85
CHD8-206ENST00000553870 NOCTQ9UK39 431 aaKnown RBP9.77□□□□□ -0.85
CHD8-206ENST00000553870 ARIH1Q9Y4X5 557 aaPredicted RBP9.77□□□□□ -0.85
CHD8-206ENST00000553870 SHISA7A6NL88 538 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 FAM170BA6NMN3 283 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 TRDMT1O14717 391 aaKnown RBP9.76□□□□□ -0.85
CHD8-206ENST00000553870 CAPN9O14815 690 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 GREM1O60565 184 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 STC2O76061 302 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 LATS1O95835 1130 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 ADH1CP00326 375 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 PDGFBP01127 241 aaPredicted RBP9.76□□□□□ -0.85
CHD8-206ENST00000553870 CYP1A1P04798 512 aaPredicted RBP9.76□□□□□ -0.85
CHD8-206ENST00000553870 MMEP08473 750 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 CHKAP35790 457 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 EIF2DP41214 584 aaKnown RBP9.76□□□□□ -0.85
CHD8-206ENST00000553870 RPS9P46781 194 aaKnown RBP9.76□□□□□ -0.85
CHD8-206ENST00000553870 HARS2P49590 506 aaKnown RBP9.76□□□□□ -0.85
CHD8-206ENST00000553870 SLC6A3Q01959 620 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 GAD2Q05329 585 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 RING1Q06587 406 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 TNK2Q07912 1038 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 MTA1Q13330 715 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 TRIP4Q15650 581 aaPredicted RBP9.76□□□□□ -0.85
CHD8-206ENST00000553870 PREPLQ4J6C6 727 aaPredicted RBP9.76□□□□□ -0.85
CHD8-206ENST00000553870 DGKKQ5KSL6 1271 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 IER5LQ5T953 404 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 CWF19L1Q69YN2 538 aaKnown RBP9.76□□□□□ -0.85
CHD8-206ENST00000553870 TRIM68Q6AZZ1 485 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 Q6ZNB5 142 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 ARCQ7LC44 396 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 IRF2BP2Q7Z5L9 587 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 MIB1Q86YT6 1006 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 PASD1Q8IV76 773 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 UNC45BQ8IWX7 931 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 PJA1Q8NG27 643 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 CCDC26Q8TAB7 109 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 BAP1Q92560 729 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 CLDN23Q96B33 292 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 TTYH3Q9C0H2 523 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 RRN3Q9NYV6 651 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 RASAL2Q9UJF2 1139 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 NUDT5Q9UKK9 219 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.76□□□□□ -0.85
CHD8-206ENST00000553870 BZW2Q9Y6E2 419 aaKnown RBP9.76□□□□□ -0.85
CHD8-206ENST00000553870 WNT6Q9Y6F9 365 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 ITIH6Q6UXX5 1313 aa9.76□□□□□ -0.85
CHD8-206ENST00000553870 SLC12A8A0AV02 714 aa9.75□□□□□ -0.85
CHD8-206ENST00000553870 OTOL1A6NHN0 477 aaPredicted RBP9.75□□□□□ -0.85
CHD8-206ENST00000553870 PIK3R2O00459 728 aa9.75□□□□□ -0.85
CHD8-206ENST00000553870 HSF2BPO75031 334 aa9.75□□□□□ -0.85
CHD8-206ENST00000553870 FYNP06241 537 aa9.75□□□□□ -0.85
CHD8-206ENST00000553870 SLC2A3P11169 496 aa9.75□□□□□ -0.85
CHD8-206ENST00000553870 NCAM1P13591 858 aa9.75□□□□□ -0.85
CHD8-206ENST00000553870 ARSAP15289 507 aa9.75□□□□□ -0.85
CHD8-206ENST00000553870 CHRNB2P17787 502 aa9.75□□□□□ -0.85
CHD8-206ENST00000553870 DRD1P21728 446 aa9.75□□□□□ -0.85
CHD8-206ENST00000553870 GBP1P32455 592 aa9.75□□□□□ -0.85
CHD8-206ENST00000553870 GJA4P35212 333 aa9.75□□□□□ -0.85
CHD8-206ENST00000553870 PRKCIP41743 596 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms