RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 AK8Q96MA6 479 aa9.62□□□□□ -0.87
PRKCH-208ENST00000553846 KLF16Q9BXK1 252 aaPredicted RBP9.62□□□□□ -0.87
PRKCH-208ENST00000553846 FGFBP2Q9BYJ0 223 aa9.62□□□□□ -0.87
PRKCH-208ENST00000553846 ELOVL4Q9GZR5 314 aa9.62□□□□□ -0.87
PRKCH-208ENST00000553846 GZF1Q9H116 711 aaPredicted RBP9.62□□□□□ -0.87
PRKCH-208ENST00000553846 EIF2B4Q9UI10 523 aaKnown RBP9.62□□□□□ -0.87
PRKCH-208ENST00000553846 SLC27A6Q9Y2P4 619 aa9.62□□□□□ -0.87
PRKCH-208ENST00000553846 PCDHGA1Q9Y5H4 931 aa9.62□□□□□ -0.87
PRKCH-208ENST00000553846 SNX11Q9Y5W9 270 aa9.62□□□□□ -0.87
PRKCH-208ENST00000553846 STON1Q9Y6Q2 735 aa9.62□□□□□ -0.87
PRKCH-208ENST00000553846 TLN1Q9Y490 2541 aaKnown RBP9.62□□□□□ -0.87
PRKCH-208ENST00000553846 TEX51A0A1B0GUA7 166 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 GOLGA8CPA6NN73 597 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 NEDD8-MDP1E9PL57 170 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 TBCAO75347 108 aaKnown RBP9.61□□□□□ -0.87
PRKCH-208ENST00000553846 DDIT3P35638 169 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 CTSKP43235 329 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 GRIA4P48058 902 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 CSNK1EP49674 416 aaKnown RBP9.61□□□□□ -0.87
PRKCH-208ENST00000553846 AFF3P51826 1226 aaKnown RBP9.61□□□□□ -0.87
PRKCH-208ENST00000553846 ZNF132P52740 706 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 SLC5A3P53794 718 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 CFHR1Q03591 330 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 SHBQ15464 509 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 RILPL1Q5EBL4 403 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 LAYNQ6UX15 382 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 ERICH1Q86X53 443 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 NUP93Q8N1F7 819 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 ZMIZ2Q8NF64 920 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 CACTINQ8WUQ7 758 aaKnown RBP9.61□□□□□ -0.87
PRKCH-208ENST00000553846 TSC1Q92574 1164 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 IGSF8Q969P0 613 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 FBXO32Q969P5 355 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 CDK5RAP3Q96JB5 506 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 KCNK16Q96T55 309 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 BBS2Q9BXC9 721 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 SEMA4CQ9C0C4 833 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 MIR1-1HGQ9H1L0 117 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 TM9SF3Q9HD45 589 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 CYLDQ9NQC7 956 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 OSER1Q9NX31 292 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 THAP10Q9P2Z0 257 aaPredicted RBP9.61□□□□□ -0.87
PRKCH-208ENST00000553846 LIMCH1Q9UPQ0 1083 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.61□□□□□ -0.87
PRKCH-208ENST00000553846 SH3BP1Q9Y3L3 701 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 LRRK2Q5S007 2527 aa9.61□□□□□ -0.87
PRKCH-208ENST00000553846 FRMD3A2A2Y4 597 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 GOLGA8IPA6NC78 632 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 GOLGA8JA6NMD2 632 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 H0Y8X5 98 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 RTN3O95197 1032 aaPredicted RBP9.6□□□□□ -0.87
PRKCH-208ENST00000553846 ABL1P00519 1130 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 KRT19P08727 400 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 FAM163BP0C2L3 166 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 PTPN1P18031 435 aaKnown RBP9.6□□□□□ -0.87
PRKCH-208ENST00000553846 PRKCHP24723 683 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 DGKGP49619 791 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 ACADVLP49748 655 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 MFAP3P55082 362 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 GNL2Q13823 731 aaKnown RBP9.6□□□□□ -0.87
PRKCH-208ENST00000553846 DHX8Q14562 1220 aaKnown RBP9.6□□□□□ -0.87
PRKCH-208ENST00000553846 GEN1Q17RS7 908 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 FYB2Q5VWT5 728 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 SDE2Q6IQ49 451 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 FBXL19Q6PCT2 694 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 NUDT18Q6ZVK8 323 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 TMPRSS6Q8IU80 811 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 LURAP1LQ8IV03 231 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 B3GALNT2Q8NCR0 500 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 LARP4BQ92615 738 aaKnown RBP9.6□□□□□ -0.87
PRKCH-208ENST00000553846 PIWIL1Q96J94 861 aaKnown RBP9.6□□□□□ -0.87
PRKCH-208ENST00000553846 NRSN2Q9GZP1 204 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 XYLT2Q9H1B5 865 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 C6orf106Q9H6K1 298 aaPredicted RBP9.6□□□□□ -0.87
PRKCH-208ENST00000553846 OLFML3Q9NRN5 406 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 WDR35Q9P2L0 1181 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 SEL1LQ9UBV2 794 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 CHORDC1Q9UHD1 332 aaPredicted RBP9.6□□□□□ -0.87
PRKCH-208ENST00000553846 DNMT3LQ9UJW3 386 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 ANKRD6Q9Y2G4 727 aa9.6□□□□□ -0.87
PRKCH-208ENST00000553846 ERVH48-1M5A8F1 160 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 CBX4O00257 560 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 KCNK3O14649 394 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 TLR5O60602 858 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 STAU1O95793 577 aaKnown RBP9.59□□□□□ -0.87
PRKCH-208ENST00000553846 TBX18O95935 607 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 TMEM191BP0C7N4 346 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 IRF1P10914 325 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 OXTRP30559 389 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 ACSL1P33121 698 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 GNL1P36915 607 aaPredicted RBP9.59□□□□□ -0.87
PRKCH-208ENST00000553846 CCT8P50990 548 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 SRSF1Q07955 248 aaKnown RBP eCLIP9.59□□□□□ -0.87
PRKCH-208ENST00000553846 TMEM215Q68D42 235 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 DYMQ7RTS9 669 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 GPR155Q7Z3F1 870 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 FAM35AQ86V20 835 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 CBWD2Q8IUF1 395 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 SPACA3Q8IXA5 215 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 SPRYD3Q8NCJ5 442 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms