RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 CLIC5Q9NZA1 410 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 USP18Q9UMW8 372 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 ASB3Q9Y575 518 aa12.27□□□□□ -0.45
NEK9-202ENST00000553823 CEP104O60308 925 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 CLASP2O75122 1294 aaKnown RBP12.26□□□□□ -0.45
NEK9-202ENST00000553823 ENDOD1O94919 500 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 LRG1P02750 347 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 RALAP11233 206 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 IL1R2P27930 398 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 RDXP35241 583 aaKnown RBP12.26□□□□□ -0.45
NEK9-202ENST00000553823 PGFP49763 221 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 PITX1P78337 314 aaPredicted RBP12.26□□□□□ -0.45
NEK9-202ENST00000553823 DEUP1Q05D60 604 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 RAB6CQ53S08 254 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 ZFYVE27Q5T4F4 411 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 OTUD1Q5VV17 481 aaPredicted RBP12.26□□□□□ -0.45
NEK9-202ENST00000553823 SCYL2Q6P3W7 929 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 BNIPLQ7Z465 357 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 DNAJB7Q7Z6W7 309 aaPredicted RBP12.26□□□□□ -0.45
NEK9-202ENST00000553823 KATNAL2Q8IYT4 538 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 PDZD8Q8NEN9 1154 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 GDPD5Q8WTR4 605 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 PSMG2Q969U7 264 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 PGAP3Q96FM1 320 aaPredicted RBP12.26□□□□□ -0.45
NEK9-202ENST00000553823 CAPZA3Q96KX2 299 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 ADAM33Q9BZ11 813 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 RAB6CQ9H0N0 254 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 PLEKHA4Q9H4M7 779 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 FAM204AQ9H8W3 233 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 ZWILCHQ9H900 591 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 OSER1Q9NX31 292 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 DDX56Q9NY93 547 aaKnown RBP12.26□□□□□ -0.45
NEK9-202ENST00000553823 UXTQ9UBK9 157 aaPredicted RBP12.26□□□□□ -0.45
NEK9-202ENST00000553823 RNF14Q9UBS8 474 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 PCSK1NQ9UHG2 260 aa12.26□□□□□ -0.45
NEK9-202ENST00000553823 EPOPA6NHQ4 379 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 GALR2O43603 387 aaPredicted RBP12.25□□□□□ -0.45
NEK9-202ENST00000553823 ZRANB2O95218 330 aaKnown RBP eCLIP12.25□□□□□ -0.45
NEK9-202ENST00000553823 F9P00740 461 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 ZDHHC11BP0C7U3 371 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 PYGMP11217 842 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 RARGP13631 454 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 GBP1P32455 592 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 CKAP4Q07065 602 aaKnown RBP12.25□□□□□ -0.45
NEK9-202ENST00000553823 NME3Q13232 169 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 ZNF211Q13398 564 aaPredicted RBP12.25□□□□□ -0.45
NEK9-202ENST00000553823 SMTNL2Q2TAL5 461 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 ATP13A4Q4VNC1 1196 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 BOLA3Q53S33 107 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 PPM1LQ5SGD2 360 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 SEL1L2Q5TEA6 688 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 CCDC181Q5TID7 509 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 TXNRD3NBQ6F5E7 133 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 MSANTD2Q6P1R3 559 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 RSRC2Q7L4I2 434 aaKnown RBP12.25□□□□□ -0.45
NEK9-202ENST00000553823 TAC4Q86UU9 113 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 CREG2Q8IUH2 290 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 RCOR2Q8IZ40 523 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 ELMOD1Q8N336 334 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 RASGEF1CQ8N431 466 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 EXD1Q8NHP7 514 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 DQX1Q8TE96 717 aaKnown RBP12.25□□□□□ -0.45
NEK9-202ENST00000553823 SLC22A17Q8WUG5 538 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 HDAC7Q8WUI4 952 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 TEKT4Q8WW24 435 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 MS4A14Q96JA4 679 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 ZNF512Q96ME7 567 aaPredicted RBP12.25□□□□□ -0.45
NEK9-202ENST00000553823 DCBLD2Q96PD2 775 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 PHF12Q96QT6 1004 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 PEBP4Q96S96 227 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 SMOC2Q9H3U7 446 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 OLA1Q9NTK5 396 aaKnown RBP12.25□□□□□ -0.45
NEK9-202ENST00000553823 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.25□□□□□ -0.45
NEK9-202ENST00000553823 TMEM51Q9NW97 253 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 DDIT4Q9NX09 232 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 CALCOCO1Q9P1Z2 691 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 OBSL1O75147 1896 aa12.25□□□□□ -0.45
NEK9-202ENST00000553823 SYNJ2BP-COX16A0A087WUM0 186 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 PER2O15055 1255 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 ZMYND10O75800 440 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 IGLV3-25P01717 112 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 KRT1P04264 644 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 RARAP10276 462 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 EPCAMP16422 314 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 CETN2P41208 172 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 PAFAH1B1P43034 410 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 PPP3CCP48454 512 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 ATXN1P54253 815 aaKnown RBP12.24□□□□□ -0.45
NEK9-202ENST00000553823 ODF2Q5BJF6 829 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 PRRC2BQ5JSZ5 2229 aaKnown RBP12.24□□□□□ -0.45
NEK9-202ENST00000553823 KCNT1Q5JUK3 1230 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 SNX30Q5VWJ9 437 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 ELMSAN1Q6PJG2 1045 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 CYP4V2Q6ZWL3 525 aaPredicted RBP12.24□□□□□ -0.45
NEK9-202ENST00000553823 SND1Q7KZF4 910 aaKnown RBP eCLIP12.24□□□□□ -0.45
NEK9-202ENST00000553823 ADGRD2Q7Z7M1 963 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 FAM131BQ86XD5 332 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 ZNF276Q8N554 614 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 CEP112Q8N8E3 955 aa12.24□□□□□ -0.45
NEK9-202ENST00000553823 CMASQ8NFW8 434 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms