RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 FBXL13Q8NEE6 735 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 NT5C1BQ96P26 610 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 FNBP1Q96RU3 617 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 ACBD6Q9BR61 282 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 ARRDC1-AS1Q9H2J1 176 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 ABCB6Q9NP58 842 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 UXTQ9UBK9 157 aaPredicted RBP16.88■□□□□ 0.29
ACTN1-209ENST00000553659 RNF14Q9UBS8 474 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 NAGPAQ9UK23 515 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 KIAA1549LQ6ZVL6 1849 aa16.88■□□□□ 0.29
ACTN1-209ENST00000553659 A0A087X0T9 212 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 GOLGA8IPA6NC78 632 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 GOLGA8JA6NMD2 632 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 LRRIQ3A6PVS8 624 aaPredicted RBP16.87■□□□□ 0.29
ACTN1-209ENST00000553659 HUS1O60921 280 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 ABL1P00519 1130 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 EGFP01133 1207 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 H2AFZP0C0S5 128 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 FAM228BP0C875 321 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 ARSAP15289 507 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 DRD1P21728 446 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 POLR2BP30876 1174 aaKnown RBP16.87■□□□□ 0.29
ACTN1-209ENST00000553659 GALK1P51570 392 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 RPL10AP62906 217 aaKnown RBP16.87■□□□□ 0.29
ACTN1-209ENST00000553659 DLG4P78352 724 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 TFAMQ00059 246 aaKnown RBP16.87■□□□□ 0.29
ACTN1-209ENST00000553659 PDGFRLQ15198 375 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 ELF2Q15723 593 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 AASDHQ4L235 1098 aaPredicted RBP16.87■□□□□ 0.29
ACTN1-209ENST00000553659 C1orf220Q5T0J3 134 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 IL31Q6EBC2 164 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 H2AFVQ71UI9 128 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 RSRC2Q7L4I2 434 aaKnown RBP16.87■□□□□ 0.29
ACTN1-209ENST00000553659 KBTBD6Q86V97 674 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 SAAL1Q96ER3 474 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 MYRFLQ96LU7 910 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 FAM213AQ9BRX8 229 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 FBRSL1Q9HCM7 1045 aaKnown RBP16.87■□□□□ 0.29
ACTN1-209ENST00000553659 DDX43Q9NXZ2 648 aaKnown RBP16.87■□□□□ 0.29
ACTN1-209ENST00000553659 NENFQ9UMX5 172 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 L1RE1Q9UN81 338 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 AGAP1Q9UPQ3 857 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 HYOU1Q9Y4L1 999 aa16.87■□□□□ 0.29
ACTN1-209ENST00000553659 HELZP42694 1942 aaKnown RBP16.87■□□□□ 0.29
ACTN1-209ENST00000553659 ACACBO00763 2458 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 RRP9O43818 475 aaKnown RBP16.86■□□□□ 0.29
ACTN1-209ENST00000553659 RNF40O75150 1001 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 EPN2O95208 641 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 ITGB3P05106 788 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 CYP2F1P24903 491 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 NAP1L1P55209 391 aaKnown RBP16.86■□□□□ 0.29
ACTN1-209ENST00000553659 WNT7BP56706 349 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 SF3A2Q15428 464 aaKnown RBP16.86■□□□□ 0.29
ACTN1-209ENST00000553659 DDR2Q16832 855 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 FBXO43Q4G163 708 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 INTS6LQ5JSJ4 861 aaKnown RBP16.86■□□□□ 0.29
ACTN1-209ENST00000553659 SDHAF4Q5VUM1 108 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 BRSK2Q8IWQ3 736 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 TMEM86AQ8N2M4 240 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 LRRC52Q8N7C0 313 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 C1orf127Q8N9H9 656 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 C12orf50Q8NA57 414 aaPredicted RBP16.86■□□□□ 0.29
ACTN1-209ENST00000553659 STKLD1Q8NE28 680 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 RIN3Q8TB24 985 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 EXOC4Q96A65 974 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 TRMT2BQ96GJ1 504 aaKnown RBP16.86■□□□□ 0.29
ACTN1-209ENST00000553659 ZC3H10Q96K80 434 aaKnown RBP16.86■□□□□ 0.29
ACTN1-209ENST00000553659 P2RY13Q9BPV8 354 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 UBE2TQ9NPD8 197 aaPredicted RBP16.86■□□□□ 0.29
ACTN1-209ENST00000553659 RAB20Q9NX57 234 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 GDAP2Q9NXN4 497 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 NUP205Q92621 2012 aa16.86■□□□□ 0.29
ACTN1-209ENST00000553659 TULP1O00294 542 aaPredicted RBP16.85■□□□□ 0.29
ACTN1-209ENST00000553659 TM4SF5O14894 197 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 ATP1A1P05023 1023 aaKnown RBP16.85■□□□□ 0.29
ACTN1-209ENST00000553659 TNFAIP3P21580 790 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 ACAT1P24752 427 aaKnown RBP16.85■□□□□ 0.29
ACTN1-209ENST00000553659 GJA4P35212 333 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 GCNT1Q02742 428 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 CCDC6Q16204 474 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 ERCC6LQ2NKX8 1250 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 GJB7Q6PEY0 223 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 SYCE1Q8N0S2 351 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 ZSWIM2Q8NEG5 633 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 CXorf38Q8TB03 319 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 SPATA18Q8TC71 538 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 PLEKHO2Q8TD55 490 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 CCDC127Q96BQ5 260 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 PKMYT1Q99640 499 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 ECT2Q9H8V3 914 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 AJAP1Q9UKB5 411 aaPredicted RBP16.85■□□□□ 0.29
ACTN1-209ENST00000553659 GTF3C4Q9UKN8 822 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 SNX12Q9UMY4 172 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 PCDHGA5Q9Y5G8 931 aa16.85■□□□□ 0.29
ACTN1-209ENST00000553659 CNOT1A5YKK6 2376 aaKnown RBP16.85■□□□□ 0.29
ACTN1-209ENST00000553659 PTPRDP23468 1912 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 MOCS3O95396 460 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 USP17L7P0C7H9 530 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 TMEM253P0C7T8 217 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 MCM3P25205 808 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms