RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 SLC9A3R1O14745 358 aaPredicted RBP23.88■■□□□ 1.41
TDP1-206ENST00000553569 SART1O43290 800 aaKnown RBP23.88■■□□□ 1.41
TDP1-206ENST00000553569 PI15O43692 258 aa23.88■■□□□ 1.41
TDP1-206ENST00000553569 NFATC1O95644 943 aa23.88■■□□□ 1.41
TDP1-206ENST00000553569 GLULP15104 373 aa23.88■■□□□ 1.41
TDP1-206ENST00000553569 AOC1P19801 751 aa23.88■■□□□ 1.41
TDP1-206ENST00000553569 CLCN5P51795 746 aa23.88■■□□□ 1.41
TDP1-206ENST00000553569 ZNF445P59923 1031 aa23.88■■□□□ 1.41
TDP1-206ENST00000553569 BBS7Q8IWZ6 715 aa23.88■■□□□ 1.41
TDP1-206ENST00000553569 PJA1Q8NG27 643 aa23.88■■□□□ 1.41
TDP1-206ENST00000553569 IPO4Q8TEX9 1081 aaKnown RBP23.88■■□□□ 1.41
TDP1-206ENST00000553569 SYNCQ9H7C4 482 aa23.88■■□□□ 1.41
TDP1-206ENST00000553569 ECT2Q9H8V3 914 aa23.88■■□□□ 1.41
TDP1-206ENST00000553569 LSM7Q9UK45 103 aaKnown RBP23.88■■□□□ 1.41
TDP1-206ENST00000553569 MRPS17Q9Y2R5 130 aaKnown RBP23.88■■□□□ 1.41
TDP1-206ENST00000553569 MTF2Q9Y483 593 aaPredicted RBP23.88■■□□□ 1.41
TDP1-206ENST00000553569 ERBB2P04626 1255 aa23.87■■□□□ 1.41
TDP1-206ENST00000553569 DCNP07585 359 aaKnown RBP23.87■■□□□ 1.41
TDP1-206ENST00000553569 TARSP26639 723 aaKnown RBP23.87■■□□□ 1.41
TDP1-206ENST00000553569 AVPR2P30518 371 aa23.87■■□□□ 1.41
TDP1-206ENST00000553569 PTPN20Q4JDL3 420 aa23.87■■□□□ 1.41
TDP1-206ENST00000553569 TXNDC11Q6PKC3 985 aa23.87■■□□□ 1.41
TDP1-206ENST00000553569 RALGPS2Q86X27 583 aaPredicted RBP23.87■■□□□ 1.41
TDP1-206ENST00000553569 ZNF677Q86XU0 584 aa23.87■■□□□ 1.41
TDP1-206ENST00000553569 FMNL3Q8IVF7 1028 aa23.87■■□□□ 1.41
TDP1-206ENST00000553569 KIAA1958Q8N8K9 716 aa23.87■■□□□ 1.41
TDP1-206ENST00000553569 MSANTD3Q96H12 275 aa23.87■■□□□ 1.41
TDP1-206ENST00000553569 TBC1D14Q9P2M4 693 aa23.87■■□□□ 1.41
TDP1-206ENST00000553569 SFMBT1Q9UHJ3 866 aa23.87■■□□□ 1.41
TDP1-206ENST00000553569 SIT1Q9Y3P8 196 aa23.87■■□□□ 1.41
TDP1-206ENST00000553569 FAM170BA6NMN3 283 aa23.86■■□□□ 1.41
TDP1-206ENST00000553569 STC2O76061 302 aa23.86■■□□□ 1.41
TDP1-206ENST00000553569 MLLT6P55198 1093 aaPredicted RBP23.86■■□□□ 1.41
TDP1-206ENST00000553569 COG7P83436 770 aa23.86■■□□□ 1.41
TDP1-206ENST00000553569 CDR2Q01850 454 aa23.86■■□□□ 1.41
TDP1-206ENST00000553569 NAA35Q5VZE5 725 aa23.86■■□□□ 1.41
TDP1-206ENST00000553569 OR6B2Q6IFH4 312 aa23.86■■□□□ 1.41
TDP1-206ENST00000553569 FAM183BPQ6ZVS7 135 aa23.86■■□□□ 1.41
TDP1-206ENST00000553569 CCDC105Q8IYK2 499 aa23.86■■□□□ 1.41
TDP1-206ENST00000553569 BAP1Q92560 729 aa23.86■■□□□ 1.41
TDP1-206ENST00000553569 PIWIL1Q96J94 861 aaKnown RBP23.86■■□□□ 1.41
TDP1-206ENST00000553569 F5P12259 2224 aa23.86■■□□□ 1.41
TDP1-206ENST00000553569 MSI1O43347 362 aaKnown RBP23.85■■□□□ 1.41
TDP1-206ENST00000553569 LSM8O95777 96 aaKnown RBP23.85■■□□□ 1.41
TDP1-206ENST00000553569 CYP17A1P05093 508 aa23.85■■□□□ 1.41
TDP1-206ENST00000553569 NCAM1P13591 858 aa23.85■■□□□ 1.41
TDP1-206ENST00000553569 CHRNB2P17787 502 aa23.85■■□□□ 1.41
TDP1-206ENST00000553569 CDH5P33151 784 aaPredicted RBP23.85■■□□□ 1.41
TDP1-206ENST00000553569 FMO1Q01740 532 aa23.85■■□□□ 1.41
TDP1-206ENST00000553569 NR1H3Q13133 447 aa23.85■■□□□ 1.41
TDP1-206ENST00000553569 PON2Q15165 354 aa23.85■■□□□ 1.41
TDP1-206ENST00000553569 ZNF318Q5VUA4 2279 aa23.85■■□□□ 1.41
TDP1-206ENST00000553569 MYOFQ9NZM1 2061 aa23.84■■□□□ 1.41
TDP1-206ENST00000553569 LRRC53A6NM62 1247 aa23.84■■□□□ 1.41
TDP1-206ENST00000553569 GREM1O60565 184 aa23.84■■□□□ 1.41
TDP1-206ENST00000553569 FERP16591 822 aa23.84■■□□□ 1.41
TDP1-206ENST00000553569 CORO1AP31146 461 aaKnown RBP23.84■■□□□ 1.41
TDP1-206ENST00000553569 GJA4P35212 333 aa23.84■■□□□ 1.41
TDP1-206ENST00000553569 SNX16P57768 344 aa23.84■■□□□ 1.41
TDP1-206ENST00000553569 NOMO3P69849 1222 aa23.84■■□□□ 1.41
TDP1-206ENST00000553569 DHCR24Q15392 516 aa23.84■■□□□ 1.41
TDP1-206ENST00000553569 NAIF1Q69YI7 327 aaPredicted RBP23.84■■□□□ 1.41
TDP1-206ENST00000553569 MSANTD2Q6P1R3 559 aa23.84■■□□□ 1.41
TDP1-206ENST00000553569 C1orf228Q6PIY5 440 aa23.84■■□□□ 1.41
TDP1-206ENST00000553569 HTR3DQ70Z44 454 aa23.84■■□□□ 1.41
TDP1-206ENST00000553569 CPA5Q8WXQ8 436 aa23.84■■□□□ 1.41
TDP1-206ENST00000553569 OTUB2Q96DC9 234 aa23.84■■□□□ 1.41
TDP1-206ENST00000553569 CHFRQ96EP1 664 aa23.84■■□□□ 1.41
TDP1-206ENST00000553569 XPO4Q9C0E2 1151 aaKnown RBP23.84■■□□□ 1.41
TDP1-206ENST00000553569 SEPT11Q9NVA2 429 aaKnown RBP23.84■■□□□ 1.41
TDP1-206ENST00000553569 NAALADL1Q9UQQ1 740 aa23.84■■□□□ 1.41
TDP1-206ENST00000553569 CAPN9O14815 690 aa23.83■■□□□ 1.41
TDP1-206ENST00000553569 FYNP06241 537 aa23.83■■□□□ 1.41
TDP1-206ENST00000553569 PBX1P40424 430 aa23.83■■□□□ 1.41
TDP1-206ENST00000553569 TAF5Q15542 800 aa23.83■■□□□ 1.41
TDP1-206ENST00000553569 ERICH1Q86X53 443 aa23.83■■□□□ 1.41
TDP1-206ENST00000553569 ADGRG2Q8IZP9 1017 aa23.83■■□□□ 1.41
TDP1-206ENST00000553569 PLD4Q96BZ4 506 aa23.83■■□□□ 1.41
TDP1-206ENST00000553569 NELL2Q99435 816 aa23.83■■□□□ 1.41
TDP1-206ENST00000553569 TRIM62Q9BVG3 475 aa23.83■■□□□ 1.41
TDP1-206ENST00000553569 TTYH3Q9C0H2 523 aa23.83■■□□□ 1.41
TDP1-206ENST00000553569 MYO6Q9UM54 1294 aa23.83■■□□□ 1.41
TDP1-206ENST00000553569 GRAP2O75791 330 aa23.82■■□□□ 1.4
TDP1-206ENST00000553569 ADH1CP00326 375 aa23.82■■□□□ 1.4
TDP1-206ENST00000553569 TPM3P06753 285 aa23.82■■□□□ 1.4
TDP1-206ENST00000553569 CCDC172P0C7W6 258 aa23.82■■□□□ 1.4
TDP1-206ENST00000553569 AMPD2Q01433 879 aa23.82■■□□□ 1.4
TDP1-206ENST00000553569 ASIC2Q16515 512 aa23.82■■□□□ 1.4
TDP1-206ENST00000553569 C2CD6Q53TS8 623 aa23.82■■□□□ 1.4
TDP1-206ENST00000553569 LY6G5CQ5SRR4 150 aa23.82■■□□□ 1.4
TDP1-206ENST00000553569 OLFML1Q6UWY5 402 aa23.82■■□□□ 1.4
TDP1-206ENST00000553569 Q6ZNB5 142 aa23.82■■□□□ 1.4
TDP1-206ENST00000553569 TOGARAM2Q6ZUX3 1019 aa23.82■■□□□ 1.4
TDP1-206ENST00000553569 MSANTD4Q8NCY6 345 aa23.82■■□□□ 1.4
TDP1-206ENST00000553569 DQX1Q8TE96 717 aaKnown RBP23.82■■□□□ 1.4
TDP1-206ENST00000553569 OSBPL6Q9BZF3 934 aa23.82■■□□□ 1.4
TDP1-206ENST00000553569 POPDC2Q9HBU9 364 aa23.82■■□□□ 1.4
TDP1-206ENST00000553569 HBS1LQ9Y450 684 aaKnown RBP23.82■■□□□ 1.4
TDP1-206ENST00000553569 KLKB1P03952 638 aa23.81■■□□□ 1.4
TDP1-206ENST00000553569 ADH5P11766 374 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms