RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 LAYNQ6UX15 382 aa5.92□□□□□ -1.46
ATXN3-218ENST00000553309 B3GNT9Q6UX72 402 aa5.92□□□□□ -1.46
ATXN3-218ENST00000553309 EPM2AIP1Q7L775 607 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-218ENST00000553309 DAAM2Q86T65 1068 aa5.92□□□□□ -1.46
ATXN3-218ENST00000553309 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.92□□□□□ -1.46
ATXN3-218ENST00000553309 PPP1R35Q8TAP8 253 aa5.92□□□□□ -1.46
ATXN3-218ENST00000553309 FKBP10Q96AY3 582 aa5.92□□□□□ -1.46
ATXN3-218ENST00000553309 UROC1Q96N76 676 aa5.92□□□□□ -1.46
ATXN3-218ENST00000553309 HAPLN3Q96S86 360 aa5.92□□□□□ -1.46
ATXN3-218ENST00000553309 HTATIP2Q9BUP3 242 aa5.92□□□□□ -1.46
ATXN3-218ENST00000553309 CPNE5Q9HCH3 593 aa5.92□□□□□ -1.46
ATXN3-218ENST00000553309 ANLNQ9NQW6 1124 aa5.92□□□□□ -1.46
ATXN3-218ENST00000553309 CNNM1Q9NRU3 951 aa5.92□□□□□ -1.46
ATXN3-218ENST00000553309 HESX1Q9UBX0 185 aa5.92□□□□□ -1.46
ATXN3-218ENST00000553309 NIP7Q9Y221 180 aaKnown RBP eCLIP5.92□□□□□ -1.46
ATXN3-218ENST00000553309 PLEKHM1Q9Y4G2 1056 aa5.92□□□□□ -1.46
ATXN3-218ENST00000553309 ENTPD2Q9Y5L3 495 aa5.92□□□□□ -1.46
ATXN3-218ENST00000553309 KIF20BQ96Q89 1820 aa5.92□□□□□ -1.46
ATXN3-218ENST00000553309 LINC00473A8K010 186 aa5.91□□□□□ -1.46
ATXN3-218ENST00000553309 PSMD14O00487 310 aa5.91□□□□□ -1.46
ATXN3-218ENST00000553309 CTNND1O60716 968 aaKnown RBP5.91□□□□□ -1.46
ATXN3-218ENST00000553309 C1QL1O75973 258 aa5.91□□□□□ -1.46
ATXN3-218ENST00000553309 ZNF134P52741 427 aa5.91□□□□□ -1.46
ATXN3-218ENST00000553309 IQCB1Q15051 598 aa5.91□□□□□ -1.46
ATXN3-218ENST00000553309 TBCCQ15814 346 aa5.91□□□□□ -1.46
ATXN3-218ENST00000553309 CCDC142Q17RM4 750 aa5.91□□□□□ -1.46
ATXN3-218ENST00000553309 PLEKHG6Q3KR16 790 aa5.91□□□□□ -1.46
ATXN3-218ENST00000553309 MAFAQ8NHW3 353 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-218ENST00000553309 IPO4Q8TEX9 1081 aaKnown RBP5.91□□□□□ -1.46
ATXN3-218ENST00000553309 RFKQ969G6 155 aa5.91□□□□□ -1.46
ATXN3-218ENST00000553309 TAAR9Q96RI9 348 aa5.91□□□□□ -1.46
ATXN3-218ENST00000553309 TIMP4Q99727 224 aa5.91□□□□□ -1.46
ATXN3-218ENST00000553309 ALG8Q9BVK2 526 aa5.91□□□□□ -1.46
ATXN3-218ENST00000553309 EHD3Q9NZN3 535 aa5.91□□□□□ -1.46
ATXN3-218ENST00000553309 DKK3Q9UBP4 350 aa5.91□□□□□ -1.46
ATXN3-218ENST00000553309 GABBR1Q9UBS5 961 aa5.91□□□□□ -1.46
ATXN3-218ENST00000553309 ZMYND8Q9ULU4 1186 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-218ENST00000553309 NAP1L2Q9ULW6 460 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-218ENST00000553309 NOB1Q9ULX3 412 aaKnown RBP5.91□□□□□ -1.46
ATXN3-218ENST00000553309 DCLK1O15075 740 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 PPM1DO15297 605 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 TTLL1O95922 423 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 GRPP07492 148 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 MYBP10242 640 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 IL6STP40189 918 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-218ENST00000553309 RAB1AP62820 205 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 FKBP1BP68106 108 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 SP3Q02447 781 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 CRY2Q49AN0 593 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 ICE2Q659A1 982 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 SFRP4Q6FHJ7 346 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-218ENST00000553309 CHPFQ8IZ52 775 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 FAM109AQ8N4B1 249 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 PBKQ96KB5 322 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 MRGPRX1Q96LB2 322 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 NT5C1BQ96P26 610 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 MOGAT1Q96PD6 335 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 PUS7Q96PZ0 661 aaKnown RBP5.9□□□□□ -1.46
ATXN3-218ENST00000553309 PIH1D1Q9NWS0 290 aaKnown RBP5.9□□□□□ -1.46
ATXN3-218ENST00000553309 XPR1Q9UBH6 696 aa5.9□□□□□ -1.46
ATXN3-218ENST00000553309 PIEZO1Q92508 2521 aa5.9□□□□□ -1.47
ATXN3-218ENST00000553309 KDM3BQ7LBC6 1761 aa5.9□□□□□ -1.47
ATXN3-218ENST00000553309 RIC1Q4ADV7 1423 aa5.9□□□□□ -1.47
ATXN3-218ENST00000553309 C1RP00736 705 aa5.89□□□□□ -1.47
ATXN3-218ENST00000553309 THP07101 528 aa5.89□□□□□ -1.47
ATXN3-218ENST00000553309 PDHA1P08559 390 aa5.89□□□□□ -1.47
ATXN3-218ENST00000553309 ATXN1LP0C7T5 689 aaKnown RBP5.89□□□□□ -1.47
ATXN3-218ENST00000553309 ZFXP17010 805 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-218ENST00000553309 FBLP22087 321 aaKnown RBP5.89□□□□□ -1.47
ATXN3-218ENST00000553309 PXNP49023 591 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-218ENST00000553309 C21orf58P58505 322 aa5.89□□□□□ -1.47
ATXN3-218ENST00000553309 MRPS21P82921 87 aaKnown RBP5.89□□□□□ -1.47
ATXN3-218ENST00000553309 BMPR2Q13873 1038 aa5.89□□□□□ -1.47
ATXN3-218ENST00000553309 FAM153CQ494X1 144 aa5.89□□□□□ -1.47
ATXN3-218ENST00000553309 PLAC9Q5JTB6 97 aa5.89□□□□□ -1.47
ATXN3-218ENST00000553309 UBE2Q1Q7Z7E8 422 aa5.89□□□□□ -1.47
ATXN3-218ENST00000553309 TICAM2Q86XR7 235 aa5.89□□□□□ -1.47
ATXN3-218ENST00000553309 ZBTB34Q8NCN2 500 aa5.89□□□□□ -1.47
ATXN3-218ENST00000553309 P2RX7Q99572 595 aaKnown RBP5.89□□□□□ -1.47
ATXN3-218ENST00000553309 GDF15Q99988 308 aa5.89□□□□□ -1.47
ATXN3-218ENST00000553309 POLR3GLQ9BT43 218 aa5.89□□□□□ -1.47
ATXN3-218ENST00000553309 PTDSS2Q9BVG9 487 aa5.89□□□□□ -1.47
ATXN3-218ENST00000553309 DBNDD1Q9H9R9 158 aa5.89□□□□□ -1.47
ATXN3-218ENST00000553309 ARPP21Q9UBL0 812 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-218ENST00000553309 MED16Q9Y2X0 877 aa5.89□□□□□ -1.47
ATXN3-218ENST00000553309 TMX2Q9Y320 296 aa5.89□□□□□ -1.47
ATXN3-218ENST00000553309 ZSWIM8A7E2V4 1837 aa5.88□□□□□ -1.47
ATXN3-218ENST00000553309 MYO1CO00159 1063 aa5.88□□□□□ -1.47
ATXN3-218ENST00000553309 RNMTO43148 476 aaKnown RBP5.88□□□□□ -1.47
ATXN3-218ENST00000553309 PROP1O75360 226 aa5.88□□□□□ -1.47
ATXN3-218ENST00000553309 URI1O94763 535 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-218ENST00000553309 S100BP04271 92 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-218ENST00000553309 U2AF1L5P0DN76 240 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-218ENST00000553309 WT1P19544 449 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-218ENST00000553309 GPD1P21695 349 aa5.88□□□□□ -1.47
ATXN3-218ENST00000553309 UCP3P55916 312 aa5.88□□□□□ -1.47
ATXN3-218ENST00000553309 LILRA4P59901 499 aa5.88□□□□□ -1.47
ATXN3-218ENST00000553309 U2AF1Q01081 240 aaKnown RBP eCLIP5.88□□□□□ -1.47
ATXN3-218ENST00000553309 EIF2B5Q13144 721 aaKnown RBP5.88□□□□□ -1.47
ATXN3-218ENST00000553309 LRRC41Q15345 812 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms