RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 SPATA31A3Q5VYP0 1347 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 hCG_1807616A0A1W2PRN6 198 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 ADM5C9JUS6 153 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 AGPSO00116 658 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 CBFA2T3O75081 653 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 TULP3O75386 442 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 CSF1RP07333 972 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 WEE2P0C1S8 567 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 UBL4AP11441 157 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 LAMP2P13473 410 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 CD19P15391 556 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 KCNA2P16389 499 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 PORP16435 677 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-208ENST00000553278 PRKCHP24723 683 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 GPD2P43304 727 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 NDUFV1P49821 464 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 CAP1Q01518 475 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 RNASELQ05823 741 aaKnown RBP6.36□□□□□ -1.39
SCFD1-208ENST00000553278 CHAF1BQ13112 559 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 FHL3Q13643 280 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 ACVR2BQ13705 512 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 DCTN1Q14203 1278 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 ACOX1Q15067 660 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 TMEM196Q5HYL7 178 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 INO80CQ6PI98 192 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-208ENST00000553278 FOXR2Q6PJQ5 311 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 KRT74Q7RTS7 529 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 GPR135Q8IZ08 494 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 CARFQ8N187 725 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 ETNPPLQ8TBG4 499 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 ADAMTS17Q8TE56 1095 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 OVCA2Q8WZ82 227 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 MCRS1Q96EZ8 462 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 MPHOSPH8Q99549 860 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 BAG1Q99933 345 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-208ENST00000553278 ITPAQ9BY32 194 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 SEPT11Q9NVA2 429 aaKnown RBP6.36□□□□□ -1.39
SCFD1-208ENST00000553278 FBXO28Q9NVF7 368 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 CTTNBP2NLQ9P2B4 639 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 HECAQ9UBI9 543 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-208ENST00000553278 STEAP1Q9UHE8 339 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 OAZ3Q9UMX2 235 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 TMEM5Q9Y2B1 443 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 PSAT1Q9Y617 370 aa6.36□□□□□ -1.39
SCFD1-208ENST00000553278 GXYLT2A0PJZ3 443 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 MBD3L5A6NJ08 208 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-208ENST00000553278 TSPY2A6NKD2 308 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 CTIFO43310 598 aaKnown RBP6.35□□□□□ -1.39
SCFD1-208ENST00000553278 B4GALT4O60513 344 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 CDC14BO60729 498 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 SUN1O94901 812 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 WDR47O94967 919 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 MLYCDO95822 493 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 TSPY3P0CV98 308 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 TSPY8P0CW00 308 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 CR2P20023 1033 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 EPHA8P29322 1005 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-208ENST00000553278 CD6P30203 668 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 MAPK4P31152 587 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 HTR7P34969 479 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 THBS4P35443 961 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 PNPLA4P41247 253 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 ANXA11P50995 505 aaKnown RBP6.35□□□□□ -1.39
SCFD1-208ENST00000553278 RARSP54136 660 aaKnown RBP6.35□□□□□ -1.39
SCFD1-208ENST00000553278 GP2P55259 537 aaKnown RBP6.35□□□□□ -1.39
SCFD1-208ENST00000553278 TSPY1Q01534 308 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 CREB5Q02930 508 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 PRICKLE4Q2TBC4 344 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 PREPLQ4J6C6 727 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-208ENST00000553278 CCDC144NLQ6NUI1 221 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 SLC30A6Q6NXT4 461 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 SLC22A25Q6T423 547 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-208ENST00000553278 PIK3AP1Q6ZUJ8 805 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 CLNKQ7Z7G1 428 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 FAM124AQ86V42 546 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 KRTAP19-1Q8IUB9 90 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 RHOT2Q8IXI1 618 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 PTGR2Q8N8N7 351 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-208ENST00000553278 C11orf44Q8N8P7 122 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 METTL6Q8TCB7 284 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 SLC2A12Q8TD20 617 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 USP6NLQ92738 828 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 NELL1Q92832 810 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 DPYSL5Q9BPU6 564 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 VN1R3Q9BXE9 311 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 USP44Q9H0E7 712 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 INTS2Q9H0H0 1204 aaKnown RBP6.35□□□□□ -1.39
SCFD1-208ENST00000553278 SLC25A18Q9H1K4 315 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 STN1Q9H668 368 aaKnown RBP6.35□□□□□ -1.39
SCFD1-208ENST00000553278 IL21RQ9HBE5 538 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 VSX1Q9NZR4 365 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-208ENST00000553278 RIMKLBQ9ULI2 386 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-208ENST00000553278 UBE2J1Q9Y385 318 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-208ENST00000553278 PCDHB7Q9Y5E2 793 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 SNX8Q9Y5X2 465 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 PIAS3Q9Y6X2 628 aa6.35□□□□□ -1.39
SCFD1-208ENST00000553278 LOC105369274A0A096LPK9 316 aa6.34□□□□□ -1.39
SCFD1-208ENST00000553278 LOC102723532A0A0G2JNH3 316 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms