RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 TMEM270Q6UE05 265 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 CLEC17AQ6ZS10 378 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 ERMP1Q7Z2K6 904 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 DGLUCYQ7Z3D6 616 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 PPM1KQ8N3J5 372 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 BHMTQ93088 406 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 BBS2Q9BXC9 721 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 SRRTQ9BXP5 876 aaKnown RBP16.69■□□□□ 0.26
CDK4-215ENST00000553237 ULBP1Q9BZM6 244 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 DNAJC17Q9NVM6 304 aaKnown RBP16.69■□□□□ 0.26
CDK4-215ENST00000553237 HESX1Q9UBX0 185 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 EBF1Q9UH73 591 aa16.69■□□□□ 0.26
CDK4-215ENST00000553237 DMXL1Q9Y485 3027 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 PRR5-ARHGAP8B1AHC4 643 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 XPO1O14980 1071 aaKnown RBP16.68■□□□□ 0.26
CDK4-215ENST00000553237 PMM2O15305 246 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 LRP3O75074 770 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 ZBED1O96006 694 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 CALCAP01258 141 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 KLKB1P03952 638 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 CHRM1P11229 460 aaPredicted RBP16.68■□□□□ 0.26
CDK4-215ENST00000553237 TYRP14679 529 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 YWHAGP61981 247 aaKnown RBP eCLIP16.68■□□□□ 0.26
CDK4-215ENST00000553237 ARHGAP8P85298 464 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 BST2Q10589 180 aaKnown RBP16.68■□□□□ 0.26
CDK4-215ENST00000553237 CETN1Q12798 172 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 KCNH2Q12809 1159 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 CSRP2Q16527 193 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 C10orf76Q5T2E6 689 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 Q6ZNB5 142 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 RSRC2Q7L4I2 434 aaKnown RBP16.68■□□□□ 0.26
CDK4-215ENST00000553237 RRAGAQ7L523 313 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 ARHGAP18Q8N392 663 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 ZNF276Q8N554 614 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 LMO3Q8TAP4 145 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 TFAP2BQ92481 460 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 CDK5RAP1Q96SZ6 601 aaKnown RBP16.68■□□□□ 0.26
CDK4-215ENST00000553237 LRRC4Q9HBW1 653 aa16.68■□□□□ 0.26
CDK4-215ENST00000553237 CDV3Q9UKY7 258 aaKnown RBP16.68■□□□□ 0.26
CDK4-215ENST00000553237 SLC12A8A0AV02 714 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 RNF225M0QZC1 329 aaPredicted RBP16.67■□□□□ 0.26
CDK4-215ENST00000553237 O00370 1275 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 ADAM23O75077 832 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 GBP1P32455 592 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 ATXN1P54253 815 aaKnown RBP16.67■□□□□ 0.26
CDK4-215ENST00000553237 COG7P83436 770 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 ADIGQ0VDE8 80 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 PLK5Q496M5 336 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 PREPLQ4J6C6 727 aaPredicted RBP16.67■□□□□ 0.26
CDK4-215ENST00000553237 USP39Q53GS9 565 aaKnown RBP16.67■□□□□ 0.26
CDK4-215ENST00000553237 EOGTQ5NDL2 527 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 PM20D1Q6GTS8 502 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 GRAMD4Q6IC98 578 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 FOXR2Q6PJQ5 311 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 PRR23CQ6ZRP0 262 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 CREBRFQ8IUR6 639 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 ARHGEF19Q8IW93 802 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 TRIM59Q8IWR1 403 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 TERB1Q8NA31 727 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 EHBP1Q8NDI1 1231 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 MDGA1Q8NFP4 955 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 LOXL4Q96JB6 756 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 ZC3H10Q96K80 434 aaKnown RBP16.67■□□□□ 0.26
CDK4-215ENST00000553237 XPO6Q96QU8 1125 aaKnown RBP16.67■□□□□ 0.26
CDK4-215ENST00000553237 PLK2Q9NYY3 685 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 MARCH2Q9P0N8 246 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 KIAA1468Q9P260 1216 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 WDR35Q9P2L0 1181 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 KIAA1257Q9ULG3 409 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 DCHS1Q96JQ0 3298 aa16.67■□□□□ 0.26
CDK4-215ENST00000553237 KIAA1549LQ6ZVL6 1849 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.66■□□□□ 0.26
CDK4-215ENST00000553237 PIK3R2O00459 728 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 P4HA2O15460 535 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 GDF9O60383 454 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 ALDH1A2O94788 518 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 EPN2O95208 641 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 GNA14O95837 355 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 PAEPP09466 180 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 LCP1P13796 627 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 BRD2P25440 801 aaKnown RBP16.66■□□□□ 0.26
CDK4-215ENST00000553237 CORO1AP31146 461 aaKnown RBP16.66■□□□□ 0.26
CDK4-215ENST00000553237 WASP42768 502 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 FOXK2Q01167 660 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 SF3A2Q15428 464 aaKnown RBP16.66■□□□□ 0.26
CDK4-215ENST00000553237 HSF5Q4G112 596 aaPredicted RBP16.66■□□□□ 0.26
CDK4-215ENST00000553237 LCLAT1Q6UWP7 414 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 TOGARAM2Q6ZUX3 1019 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 NUDT18Q6ZVK8 323 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 BHLHA9Q7RTU4 235 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 RASSF3Q86WH2 238 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 ZNF513Q8N8E2 541 aaPredicted RBP16.66■□□□□ 0.26
CDK4-215ENST00000553237 P2RY11Q96G91 374 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 CNOT6LQ96LI5 555 aaKnown RBP16.66■□□□□ 0.26
CDK4-215ENST00000553237 ZSWIM1Q9BR11 485 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 DUSP15Q9H1R2 295 aaPredicted RBP16.66■□□□□ 0.26
CDK4-215ENST00000553237 SMOC1Q9H4F8 434 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 MARK1Q9P0L2 795 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 HCN2Q9UL51 889 aa16.66■□□□□ 0.26
CDK4-215ENST00000553237 STRIP2Q9ULQ0 834 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms