RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 ZCWPW1Q9H0M4 648 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 EBF3Q9H4W6 596 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 KRT82Q9NSB4 513 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 GTF3C4Q9UKN8 822 aa12□□□□□ -0.49
TMEM116-218ENST00000552839 PTPRDP23468 1912 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 A0A1W2PQJ5 194 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 BCLAF3A2AJT9 711 aaKnown RBP11.99□□□□□ -0.49
TMEM116-218ENST00000552839 LRRC53A6NM62 1247 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 M0QYV0 167 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 EPHB6O15197 1021 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 CYP26A1O43174 497 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 HCRTO43612 131 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 NRDCO43847 1150 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 PNMA6AP0CW24 399 aaPredicted RBP11.99□□□□□ -0.49
TMEM116-218ENST00000552839 CCDC130P13994 396 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 ATF6P18850 670 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 BRD2P25440 801 aaKnown RBP11.99□□□□□ -0.49
TMEM116-218ENST00000552839 CDC25CP30307 473 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 KRT9P35527 623 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 GRIK1P39086 918 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 RPL10AP62906 217 aaKnown RBP11.99□□□□□ -0.49
TMEM116-218ENST00000552839 CREB5Q02930 508 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 ZNF252P-AS1Q0IIN9 211 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 GOLGA7BQ2TAP0 167 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 FIGNQ5HY92 759 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 LIMS2Q7Z4I7 341 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 VPS36Q86VN1 386 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 CMTM8Q8IZV2 173 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 SPC24Q8NBT2 197 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 SLC2A14Q8TDB8 520 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 SMARCD1Q96GM5 515 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 TWNKQ96RR1 684 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 EDEM3Q9BZQ6 932 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 HSFX1Q9UBD0 423 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 AJAP1Q9UKB5 411 aaPredicted RBP11.99□□□□□ -0.49
TMEM116-218ENST00000552839 KIAA1257Q9ULG3 409 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 MYO6Q9UM54 1294 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 CCL26Q9Y258 94 aa11.99□□□□□ -0.49
TMEM116-218ENST00000552839 FRYQ5TBA9 3013 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 LNP1A1A4G5 178 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 AKR1B15C9JRZ8 316 aaPredicted RBP11.98□□□□□ -0.49
TMEM116-218ENST00000552839 FOXN3O00409 490 aaPredicted RBP11.98□□□□□ -0.49
TMEM116-218ENST00000552839 TRIM66O15016 1216 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 ATP2C2O75185 946 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 AP1G2O75843 785 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 NOL4O94818 638 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 RHOBTB1O94844 696 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 PTMAP06454 111 aaKnown RBP11.98□□□□□ -0.49
TMEM116-218ENST00000552839 ARSAP15289 507 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 ACO1P21399 889 aaKnown RBP11.98□□□□□ -0.49
TMEM116-218ENST00000552839 CASP14P31944 242 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 TUFMP49411 452 aaKnown RBP11.98□□□□□ -0.49
TMEM116-218ENST00000552839 GALK1P51570 392 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 RAD23BP54727 409 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 ZBED6P86452 979 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 ELF2Q15723 593 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 SH3PXD2AQ5TCZ1 1133 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 TAF3Q5VWG9 929 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 DAB2IPQ5VWQ8 1189 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 NAIF1Q69YI7 327 aaPredicted RBP11.98□□□□□ -0.49
TMEM116-218ENST00000552839 TMEM150AQ86TG1 271 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 FAM35AQ86V20 835 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 SLC4A11Q8NBS3 891 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 MSANTD4Q8NCY6 345 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 RIN3Q8TB24 985 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 GIPC2Q8TF65 315 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 USP13Q92995 863 aaPredicted RBP11.98□□□□□ -0.49
TMEM116-218ENST00000552839 CYFIP2Q96F07 1278 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 PCED1BQ96HM7 432 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 FUBP3Q96I24 572 aaKnown RBP eCLIP11.98□□□□□ -0.49
TMEM116-218ENST00000552839 NOX5Q96PH1 765 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 ADAM33Q9BZ11 813 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 DEF6Q9H4E7 631 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 ABCB6Q9NP58 842 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 DMAP1Q9NPF5 467 aaPredicted RBP11.98□□□□□ -0.49
TMEM116-218ENST00000552839 CRTAC1Q9NQ79 661 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 ASCC3Q8N3C0 2202 aaKnown RBP11.98□□□□□ -0.49
TMEM116-218ENST00000552839 MYH10P35580 1976 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 ANAPC1Q9H1A4 1944 aa11.98□□□□□ -0.49
TMEM116-218ENST00000552839 PCNX2A6NKB5 2137 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 CDX4O14627 284 aaPredicted RBP11.97□□□□□ -0.49
TMEM116-218ENST00000552839 AP5Z1O43299 807 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 BDNFP23560 247 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 CDC25BP30305 580 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 PBX1P40424 430 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 BCAT1P54687 386 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 KLHL30Q0D2K2 578 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 IFRD2Q12894 506 aaPredicted RBP11.97□□□□□ -0.49
TMEM116-218ENST00000552839 SMYD5Q6GMV2 418 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 SYT13Q7L8C5 426 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 FAM71AQ8IYT1 594 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 CRYBG2Q8N1P7 616 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 UBR7Q8N806 425 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 MAB21L3Q8N8X9 362 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 C12orf29Q8N999 325 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 RPLP0P6Q8NHW5 317 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 EZH1Q92800 747 aaPredicted RBP11.97□□□□□ -0.49
TMEM116-218ENST00000552839 GATA6Q92908 595 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 GCNAQ96QF7 691 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 SCNM1Q9BWG6 230 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms