RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 C1QTNF1Q9BXJ1 281 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 LRRC27Q9C0I9 530 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 NUP62CLQ9H1M0 184 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 IL25Q9H293 177 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 DCTPP1Q9H773 170 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 TCP11L1Q9NUJ3 509 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 LMBRD1Q9NUN5 540 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 MOCS1Q9NZB8 636 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 NCDNQ9UBB6 729 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 TRPS1Q9UHF7 1281 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 PUF60Q9UHX1 559 aaKnown RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 FEZ2Q9UHY8 353 aaPredicted RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 TPCN1Q9ULQ1 816 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 PHTF1Q9UMS5 762 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 COG5Q9UP83 839 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 SMG5Q9UPR3 1016 aaKnown RBP2.73□□□□□ -1.97
CPSF6-207ENST00000551516 HDAC5Q9UQL6 1122 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 SIK3Q9Y2K2 1263 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 PCDHGB6Q9Y5F9 930 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 PCDHA3Q9Y5H8 950 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 ACACBO00763 2458 aa2.73□□□□□ -1.97
CPSF6-207ENST00000551516 ATAD5Q96QE3 1844 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 FRMPD4Q14CM0 1322 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 FRYQ5TBA9 3013 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 A0A1W2PPL8 197 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 LRRC37A2A6NM11 1700 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.72□□□□□ -1.97
CPSF6-207ENST00000551516 LOC730098B7Z3J9 87 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 PHGDHO43175 533 aaKnown RBP2.72□□□□□ -1.97
CPSF6-207ENST00000551516 ARHGAP6O43182 974 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 ANP32CO43423 234 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 EDIL3O43854 480 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 ORC4O43929 436 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 GPR32O75388 356 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 PRDM1O75626 825 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 GLP2RO95838 553 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 ICAM1P05362 532 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 MYL3P08590 195 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 C1QTNF9P0C862 333 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 ZNF888P0CJ79 500 aaPredicted RBP2.72□□□□□ -1.97
CPSF6-207ENST00000551516 TYRP14679 529 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 IL9P15248 144 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 RPL17P18621 184 aaKnown RBP2.72□□□□□ -1.97
CPSF6-207ENST00000551516 MALP21145 153 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 DNAJB1P25685 340 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 PEX2P28328 305 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 SLC6A9P48067 706 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 ALDH5A1P51649 535 aaPredicted RBP2.72□□□□□ -1.97
CPSF6-207ENST00000551516 ADCY7P51828 1080 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 NPEPPSP55786 919 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 CTXN1P60606 82 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 SNAP25P60880 206 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 RAB1AP62820 205 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 NKX6-1P78426 367 aaPredicted RBP2.72□□□□□ -1.97
CPSF6-207ENST00000551516 APBA1Q02410 837 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 CREMQ03060 361 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 TNFAIP2Q03169 654 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 PTH1RQ03431 593 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 MESP2Q0VG99 397 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 TARDBPQ13148 414 aaKnown RBP eCLIP2.72□□□□□ -1.971e-6■■■■□ 25.5
CPSF6-207ENST00000551516 BAATQ14032 418 aaPredicted RBP2.72□□□□□ -1.97
CPSF6-207ENST00000551516 KCTD2Q14681 263 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 POLD3Q15054 466 aaPredicted RBP2.72□□□□□ -1.97
CPSF6-207ENST00000551516 TTC39AQ5SRH9 613 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 VPS53Q5VIR6 699 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 SLC30A10Q6XR72 485 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.72□□□□□ -1.975e-9■■■■■ 33.5
CPSF6-207ENST00000551516 CCDC129Q6ZRS4 1044 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 HEATR3Q7Z4Q2 680 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 RPAINQ86UA6 219 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 SERINC5Q86VE9 423 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 FBXO16Q8IX29 292 aaPredicted RBP2.72□□□□□ -1.97
CPSF6-207ENST00000551516 FAM186BQ8IYM0 893 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 CMTM4Q8IZR5 234 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 TMEM199Q8N511 208 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 SH2D3CQ8N5H7 860 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 LINC01356Q8N9X3 169 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 VN1R2Q8NFZ6 395 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 OR14K1Q8NGZ2 314 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 BRIX1Q8TDN6 353 aaKnown RBP2.72□□□□□ -1.97
CPSF6-207ENST00000551516 PARD3BQ8TEW8 1205 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 ATP8B4Q8TF62 1192 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 CASKIN2Q8WXE0 1202 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 STON2Q8WXE9 905 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 SUSD6Q92537 303 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 HOXB13Q92826 284 aaPredicted RBP2.72□□□□□ -1.97
CPSF6-207ENST00000551516 TOP1MTQ969P6 601 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 RAB24Q969Q5 203 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 DACT3Q96B18 629 aaPredicted RBP2.72□□□□□ -1.97
CPSF6-207ENST00000551516 FAM122AQ96E09 287 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 KIF1BPQ96EK5 621 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 SLC35A4Q96G79 324 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 SLC39A13Q96H72 371 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 DMRTA2Q96SC8 542 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 PDCD2LQ9BRP1 358 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 NAA15Q9BXJ9 866 aaKnown RBP2.72□□□□□ -1.97
CPSF6-207ENST00000551516 CRNKL1Q9BZJ0 848 aaKnown RBP2.72□□□□□ -1.97
CPSF6-207ENST00000551516 MAF1Q9H063 256 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 EPC1Q9H2F5 836 aa2.72□□□□□ -1.97
CPSF6-207ENST00000551516 BHMT2Q9H2M3 363 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms