RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 ELMOD1Q8N336 334 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 RBM15BQ8NDT2 890 aaKnown RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 FBXO27Q8NI29 283 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 ANGPTL6Q8NI99 470 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 MORC4Q8TE76 937 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 SH3RF3Q8TEJ3 882 aaPredicted RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 GDPD5Q8WTR4 605 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 MZB1Q8WU39 189 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 TRUB1Q8WWH5 349 aaKnown RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 RFFLQ8WZ73 363 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 JADE3Q92613 823 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 TANKQ92844 425 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 DHRS4Q9BTZ2 278 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 RUSC1Q9BVN2 902 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 TRIM31Q9BZY9 425 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 CDH19Q9H159 772 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 CCDC86Q9H6F5 360 aaKnown RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 AKTIPQ9H8T0 292 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 PARVGQ9HBI0 331 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 KIAA1586Q9HCI6 787 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 MLXIPLQ9NP71 852 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 KCNK9Q9NPC2 374 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 SIX2Q9NPC8 291 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 TBC1D23Q9NUY8 699 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 RRN3Q9NYV6 651 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 HEY2Q9UBP5 337 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 CNOT11Q9UKZ1 510 aaKnown RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 PCDHA6Q9UN73 950 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 EXOC7Q9UPT5 735 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 DNM3Q9UQ16 869 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 ERGIC3Q9Y282 383 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 ZNF652Q9Y2D9 606 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 SIPA1L3O60292 1781 aaPredicted RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 ROBO2Q9HCK4 1378 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 KAT6BQ8WYB5 2073 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 DIP2CQ9Y2E4 1556 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 ZNF532Q9HCE3 1301 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 BTBD11A6QL63 1104 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 B2RBV5 119 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 KLRF2D3W0D1 207 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 K7EPI3 171 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 ADAMTS3O15072 1205 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 GCATO75600 419 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 STAM2O75886 525 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 FKBP9O95302 570 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 TIAF1O95411 115 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 ESRRBO95718 433 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 CRTAMO95727 393 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 ABCB1P08183 1280 aaPredicted RBP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 OCM2P0CE71 109 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 OCMP0CE72 109 aaPredicted RBP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 CHRNB1P11230 501 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 NAGAP17050 411 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 ATF7P17544 494 aaPredicted RBP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 M6PRP20645 277 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 PEX2P28328 305 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 ADSSP30520 456 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 GALCP54803 685 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 IRX4P78413 519 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 GRSF1Q12849 480 aaKnown RBP eCLIP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 CTTNQ14247 550 aaKnown RBP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 PSMD6Q15008 389 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 PRKD1Q15139 912 aaPredicted RBP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 TBCCQ15814 346 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 MMEL1Q495T6 779 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 DCAF6Q58WW2 860 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 LVRNQ6Q4G3 990 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 PIK3AP1Q6ZUJ8 805 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 SH2D5Q6ZV89 423 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 CENPUQ71F23 418 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 ANO5Q75V66 913 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 ERMP1Q7Z2K6 904 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 SLC13A5Q86YT5 568 aaPredicted RBP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 FAM20CQ8IXL6 584 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 THEMISQ8N1K5 641 aaPredicted RBP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 ZNF713Q8N859 430 aaPredicted RBP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 MINDY2Q8NBR6 621 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 LILRB4Q8NHJ6 448 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 CEP70Q8NHQ1 597 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 UHMK1Q8TAS1 419 aaKnown RBP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 LNX1Q8TBB1 728 aaPredicted RBP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 HM13Q8TCT9 377 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 GRIN3AQ8TCU5 1115 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 DPF3Q92784 378 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 GAL3ST3Q96A11 431 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 TP53INP1Q96A56 240 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 CCDC127Q96BQ5 260 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 SDCCAG3Q96C92 435 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 C18orf8Q96DM3 657 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 MTBPQ96DY7 904 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 MAELQ96JY0 434 aaKnown RBP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 CNDP2Q96KP4 475 aaKnown RBP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 UBL7Q96S82 380 aaPredicted RBP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 WDR18Q9BV38 432 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 CCDC106Q9BWC9 280 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 IMPG2Q9BZV3 1241 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 DCLK3Q9C098 648 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 RNF208Q9H0X6 261 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 CCDC68Q9H2F9 335 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 C12orf10Q9HB07 376 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms