RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 APBB1IPQ7Z5R6 666 aaPredicted RBP6.26□□□□□ -1.41
SCAF11-213ENST00000550629 GUF1Q8N442 669 aaKnown RBP6.26□□□□□ -1.41
SCAF11-213ENST00000550629 MLKLQ8NB16 471 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 UHMK1Q8TAS1 419 aaKnown RBP6.26□□□□□ -1.41
SCAF11-213ENST00000550629 GOLGA5Q8TBA6 731 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 PTPRN2Q92932 1015 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 ZBTB10Q96DT7 871 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 CCDC51Q96ER9 411 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 ZSWIM3Q96MP5 696 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 SCLT1Q96NL6 688 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 SRPK1Q96SB4 655 aaKnown RBP6.26□□□□□ -1.41
SCAF11-213ENST00000550629 FIZ1Q96SL8 496 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 DNAJC7Q99615 494 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 DHRS4Q9BTZ2 278 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 FZD8Q9H461 694 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 ZHX3Q9H4I2 956 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 TMEM206Q9H813 350 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 CHST12Q9NRB3 414 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 PRMT7Q9NVM4 692 aaPredicted RBP6.26□□□□□ -1.41
SCAF11-213ENST00000550629 CGNQ9P2M7 1197 aaKnown RBP6.26□□□□□ -1.41
SCAF11-213ENST00000550629 TBX20Q9UMR3 447 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 EXOC7Q9UPT5 735 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 NR2E3Q9Y5X4 410 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 CDY2AQ9Y6F7 541 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 DUSP10Q9Y6W6 482 aa6.26□□□□□ -1.41
SCAF11-213ENST00000550629 ADGRA3Q8IWK6 1321 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 CNTNAP2Q9UHC6 1331 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 KIAA0100Q14667 2235 aaKnown RBP6.25□□□□□ -1.41
SCAF11-213ENST00000550629 A0A087WZ62 844 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 DENND3A2RUS2 1198 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 INO80B-WBP1J3KQ70 363 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 K7ENM7 598 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 AQP7O14520 342 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 PSMA7O14818 248 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 ERLIN2O94905 339 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 GCNT3O95395 438 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 PIGRP01833 764 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 CXCL10P02778 98 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 IQCF3P0C7M6 154 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 CASP1P29466 404 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 RGS19P49795 217 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 STK4Q13043 487 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 PRPF4BQ13523 1007 aaKnown RBP6.25□□□□□ -1.41
SCAF11-213ENST00000550629 STIM1Q13586 685 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 LPIN1Q14693 890 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 LONRF2Q1L5Z9 754 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 ZFYVE27Q5T4F4 411 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 L1TD1Q5T7N2 865 aaKnown RBP6.25□□□□□ -1.41
SCAF11-213ENST00000550629 MFSD5Q6N075 450 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 SASS6Q6UVJ0 657 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 TMC5Q6UXY8 1006 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 MTDHQ86UE4 582 aaKnown RBP6.25□□□□□ -1.41
SCAF11-213ENST00000550629 PROSER1Q86XN7 944 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 MYOCDQ8IZQ8 938 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 ADSSL1Q8N142 457 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 TMEM199Q8N511 208 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 KIAA0895Q8NCT3 520 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 SCFD1Q8WVM8 642 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 DDX1Q92499 740 aaKnown RBP6.25□□□□□ -1.41
SCAF11-213ENST00000550629 APBB2Q92870 758 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 DHTKD1Q96HY7 919 aaPredicted RBP6.25□□□□□ -1.41
SCAF11-213ENST00000550629 ACCSQ96QU6 501 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 FDXACB1Q9BRP7 624 aaPredicted RBP6.25□□□□□ -1.41
SCAF11-213ENST00000550629 FTHL17Q9BXU8 183 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 MRPL4Q9BYD3 311 aaKnown RBP6.25□□□□□ -1.41
SCAF11-213ENST00000550629 WNT8AQ9H1J5 351 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 HSPBP1Q9NZL4 362 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 MAN1B1Q9UKM7 699 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 CNOT11Q9UKZ1 510 aaKnown RBP6.25□□□□□ -1.41
SCAF11-213ENST00000550629 DSEQ9UL01 958 aa6.25□□□□□ -1.41
SCAF11-213ENST00000550629 MRPS23Q9Y3D9 190 aaKnown RBP6.25□□□□□ -1.41
SCAF11-213ENST00000550629 A0A1B0GUA9 196 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 BICDL2A1A5D9 508 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 TRIM43BA6NCK2 446 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 PDXKO00764 312 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 HNRNPDLO14979 420 aaKnown RBP6.24□□□□□ -1.41
SCAF11-213ENST00000550629 KIAA0391O15091 583 aaKnown RBP6.24□□□□□ -1.41
SCAF11-213ENST00000550629 TSPAN1O60635 241 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 EFCAB14O75071 495 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 RPS6KA5O75582 802 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 TOM1L1O75674 476 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 PRKCBP05771 671 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 CCDC192P0DO97 292 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 MYBP10242 640 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 NMT1P30419 496 aaKnown RBP6.24□□□□□ -1.41
SCAF11-213ENST00000550629 RAB27AP51159 221 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 CASP5P51878 434 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 POU5F1Q01860 360 aaKnown RBP6.24□□□□□ -1.41
SCAF11-213ENST00000550629 LRRC63Q05C16 580 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 PAK1Q13153 545 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 PPIGQ13427 754 aaKnown RBP eCLIP6.24□□□□□ -1.41
SCAF11-213ENST00000550629 MYBPC2Q14324 1141 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 STX1AQ16623 288 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 KYAT1Q16773 422 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 KNOP1Q1ED39 458 aaKnown RBP6.24□□□□□ -1.41
SCAF11-213ENST00000550629 ZSCAN23Q3MJ62 389 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 ZC2HC1CQ53FD0 456 aaPredicted RBP6.24□□□□□ -1.41
SCAF11-213ENST00000550629 PLEKHG4Q58EX7 1191 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 SLFN12LQ6IEE8 588 aa6.24□□□□□ -1.41
SCAF11-213ENST00000550629 CATSPER4Q7RTX7 472 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms