RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 GLIS3Q8NEA6 775 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 CNPY3Q9BT09 278 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 CYP4F12Q9HCS2 524 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 HMG20AQ9NP66 347 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 PYGLP06737 847 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 CCDC130P13994 396 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 ATP6V1B2P21281 511 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 SOX6P35712 828 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 PCSK7Q16549 785 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 RGS21Q2M5E4 152 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 CCDC153Q494R4 210 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 EMC1Q8N766 993 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 ZSWIM2Q8NEG5 633 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 MRPS26Q9BYN8 205 aaKnown RBP16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 MFN2O95140 757 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 ZSCAN5DPP0CG00 497 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 CHKAP35790 457 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 PKNOX1P55347 436 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 TRIM25Q14258 630 aaKnown RBP16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 CYP2R1Q6VVX0 501 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 OTOAQ7RTW8 1153 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 ZSCAN18Q8TBC5 510 aaPredicted RBP16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 SEPT8Q92599 483 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 IMPAD1Q9NX62 359 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 CD274Q9NZQ7 290 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 CNTNAP4Q9C0A0 1308 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 CBFA2T3O75081 653 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 PDGFRBP09619 1106 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 GP5P40197 560 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 NPTX2P47972 431 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 OTUD3Q5T2D3 398 aaPredicted RBP16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 GPATCH2LQ9NWQ4 482 aa16.26■□□□□ 0.19
RBFOX1-212ENST00000550418 DCDC2CA8MYV0 355 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 ADCY6O43306 1168 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 CYP24A1Q07973 514 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 GOLGA7BQ2TAP0 167 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 AAGABQ6PD74 315 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 NANOGNBQ7Z5D8 188 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 COQ7Q99807 217 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 IARS2Q9NSE4 1012 aaKnown RBP16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 VTI1BQ9UEU0 232 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 NCANO14594 1321 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 RNF103O00237 685 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 NPTXRO95502 500 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 MARCKSL1P49006 195 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 RAB14P61106 215 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 CBWD6Q4V339 395 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 CBWD3Q5JTY5 395 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 CBWD5Q5RIA9 395 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 ZNF618Q5T7W0 954 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 ULK2Q8IYT8 1036 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 LNX1Q8TBB1 728 aaPredicted RBP16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 AGBL1Q96MI9 1066 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 BDH2Q9BUT1 245 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 C1orf50Q9BV19 199 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 SEMA6AQ9H2E6 1030 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 ZNF197O14709 1029 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 TNPO2O14787 897 aaKnown RBP16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 ARMCX4Q5H9R4 360 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 CEP78Q5JTW2 689 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 CDC42EP5Q6NZY7 148 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 KATNAL2Q8IYT4 538 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 FBXW8Q8N3Y1 598 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 STX19Q8N4C7 294 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 CEP44Q9C0F1 390 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 MTFR1LQ9H019 292 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 PSMB9P28065 219 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 BST1Q10588 318 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 LIN52Q52LA3 116 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 MFSD5Q6N075 450 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 TRABD2AQ86V40 505 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 ERO1BQ86YB8 467 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 OSCP1Q8WVF1 389 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 TRIM63Q969Q1 353 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 PABPC5Q96DU9 382 aaKnown RBP16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 MTERF3Q96E29 417 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 ZNF333Q96JL9 665 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 C9orf16Q9BUW7 83 aa16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 FBXO6Q9NRD1 293 aaPredicted RBP16.25■□□□□ 0.19
RBFOX1-212ENST00000550418 UBR1Q8IWV7 1749 aa16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 A0A1B0GW55 424 aa16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 PRR23D1E9PI22 279 aaPredicted RBP16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 TRIM24O15164 1050 aa16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 GSC2O15499 205 aa16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 LDLRP01130 860 aa16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 DUX4L2P0CJ85 424 aa16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 DUX4L3P0CJ86 424 aa16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 DUX4L4P0CJ87 422 aa16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 DUX4L5P0CJ88 424 aa16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 DUX4L6P0CJ89 424 aa16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 DUX4L7P0CJ90 424 aa16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 PRR23D2P0DMB1 279 aaPredicted RBP16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 CYP2C8P10632 490 aa16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 MYL4P12829 197 aa16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 MAPK10P53779 464 aa16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 ACAP1Q15027 740 aa16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 ECHDC2Q86YB7 292 aa16.24■□□□□ 0.19
RBFOX1-212ENST00000550418 BHLHE22Q8NFJ8 381 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms