RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 IPO4Q8TEX9 1081 aaKnown RBP23.57■■□□□ 1.36
BRF1-216ENST00000550208 C18orf8Q96DM3 657 aa23.57■■□□□ 1.36
BRF1-216ENST00000550208 HAUS4Q9H6D7 363 aa23.57■■□□□ 1.36
BRF1-216ENST00000550208 OLA1Q9NTK5 396 aaKnown RBP23.57■■□□□ 1.36
BRF1-216ENST00000550208 SEPT11Q9NVA2 429 aaKnown RBP23.57■■□□□ 1.36
BRF1-216ENST00000550208 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.57■■□□□ 1.363e-6■■■□□ 15.9
BRF1-216ENST00000550208 OTOL1A6NHN0 477 aaPredicted RBP23.56■■□□□ 1.36
BRF1-216ENST00000550208 GREM1O60565 184 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 GYPCP04921 128 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 SKILP12757 684 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 UNGP13051 313 aaPredicted RBP23.56■■□□□ 1.36
BRF1-216ENST00000550208 NCAM1P13591 858 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 TNFAIP3P21580 790 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 YWHAZP63104 245 aaKnown RBP23.56■■□□□ 1.36
BRF1-216ENST00000550208 COG7P83436 770 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 ZBED6P86452 979 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 SLC6A3Q01959 620 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 RUNX3Q13761 415 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 EML3Q32P44 896 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 SYPL2Q5VXT5 272 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 FMNL3Q8IVF7 1028 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 VSTM4Q8IW00 320 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 PBXIP1Q96AQ6 731 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 IQCDQ96DY2 449 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 SYT11Q9BT88 431 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 ANP32EQ9BTT0 268 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 C1QTNF1Q9BXJ1 281 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 TRIM5Q9C035 493 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 STRIP2Q9ULQ0 834 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 LUC7L2Q9Y383 392 aaKnown RBP23.56■■□□□ 1.36
BRF1-216ENST00000550208 TRIOO75962 3097 aa23.56■■□□□ 1.36
BRF1-216ENST00000550208 STC2O76061 302 aa23.55■■□□□ 1.36
BRF1-216ENST00000550208 CASP14P31944 242 aa23.55■■□□□ 1.36
BRF1-216ENST00000550208 PRKCIP41743 596 aa23.55■■□□□ 1.36
BRF1-216ENST00000550208 SOX9P48436 509 aa23.55■■□□□ 1.36
BRF1-216ENST00000550208 KPNA1P52294 538 aaPredicted RBP23.55■■□□□ 1.36
BRF1-216ENST00000550208 CLEC16AQ2KHT3 1053 aa23.55■■□□□ 1.36
BRF1-216ENST00000550208 ITPRIPL2Q3MIP1 535 aa23.55■■□□□ 1.36
BRF1-216ENST00000550208 EFHC1Q5JVL4 640 aa23.55■■□□□ 1.36
BRF1-216ENST00000550208 SPECC1LQ69YQ0 1117 aa23.55■■□□□ 1.36
BRF1-216ENST00000550208 MSANTD2Q6P1R3 559 aa23.55■■□□□ 1.36
BRF1-216ENST00000550208 OLFML1Q6UWY5 402 aa23.55■■□□□ 1.36
BRF1-216ENST00000550208 HTR3DQ70Z44 454 aa23.55■■□□□ 1.36
BRF1-216ENST00000550208 ADGRG2Q8IZP9 1017 aa23.55■■□□□ 1.36
BRF1-216ENST00000550208 KIAA1958Q8N8K9 716 aa23.55■■□□□ 1.36
BRF1-216ENST00000550208 ZNF397Q8NF99 534 aaPredicted RBP23.55■■□□□ 1.36
BRF1-216ENST00000550208 OLIG1Q8TAK6 271 aa23.55■■□□□ 1.36
BRF1-216ENST00000550208 POPDC2Q9HBU9 364 aa23.55■■□□□ 1.36
BRF1-216ENST00000550208 TICRRQ7Z2Z1 1910 aa23.55■■□□□ 1.36
BRF1-216ENST00000550208 KIF26AQ9ULI4 1882 aaPredicted RBP23.54■■□□□ 1.36
BRF1-216ENST00000550208 MUC3AQ02505 3323 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 SHISA7A6NL88 538 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 GRAP2O75791 330 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 CD72P21854 359 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 STARD6P59095 220 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 PRKCQQ04759 706 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 GOLGA8FQ08AF8 430 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 GOLGA8DPQ0D2H9 430 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 KLHL30Q0D2K2 578 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 TMEM31Q5JXX7 168 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 TPRG1Q6ZUI0 275 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 BEND5Q7L4P6 421 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 ZNF571Q7Z3V5 609 aaPredicted RBP23.54■■□□□ 1.36
BRF1-216ENST00000550208 BMP8AQ7Z5Y6 402 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 XYLT1Q86Y38 959 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 BBS7Q8IWZ6 715 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 DEFB106AQ8N104 65 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 NUCKS1Q9H1E3 243 aaKnown RBP23.54■■□□□ 1.36
BRF1-216ENST00000550208 MFSD1Q9H3U5 465 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 ECT2Q9H8V3 914 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 ASNSD1Q9NWL6 643 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 TBC1D14Q9P2M4 693 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 PIAS3Q9Y6X2 628 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 COL4A3Q01955 1670 aa23.54■■□□□ 1.36
BRF1-216ENST00000550208 STK25O00506 426 aa23.53■■□□□ 1.36
BRF1-216ENST00000550208 SLC9A3R1O14745 358 aaPredicted RBP23.53■■□□□ 1.36
BRF1-216ENST00000550208 CAPN9O14815 690 aa23.53■■□□□ 1.36
BRF1-216ENST00000550208 KLKB1P03952 638 aa23.53■■□□□ 1.36
BRF1-216ENST00000550208 GLI1P08151 1106 aa23.53■■□□□ 1.36
BRF1-216ENST00000550208 MMP8P22894 467 aa23.53■■□□□ 1.36
BRF1-216ENST00000550208 MMS22LQ6ZRQ5 1243 aa23.53■■□□□ 1.36
BRF1-216ENST00000550208 PHLDB2Q86SQ0 1253 aa23.53■■□□□ 1.36
BRF1-216ENST00000550208 ZDHHC17Q8IUH5 632 aa23.53■■□□□ 1.36
BRF1-216ENST00000550208 MSANTD4Q8NCY6 345 aa23.53■■□□□ 1.36
BRF1-216ENST00000550208 FLCNQ8NFG4 579 aa23.53■■□□□ 1.36
BRF1-216ENST00000550208 DQX1Q8TE96 717 aaKnown RBP23.53■■□□□ 1.36
BRF1-216ENST00000550208 SYN2Q92777 582 aaPredicted RBP23.53■■□□□ 1.36
BRF1-216ENST00000550208 ATP2A3Q93084 1043 aa23.53■■□□□ 1.36
BRF1-216ENST00000550208 SHDQ96IW2 340 aa23.53■■□□□ 1.36
BRF1-216ENST00000550208 LSM7Q9UK45 103 aaKnown RBP23.53■■□□□ 1.36
BRF1-216ENST00000550208 MSI1O43347 362 aaKnown RBP23.52■■□□□ 1.36
BRF1-216ENST00000550208 CENPCQ03188 943 aa23.52■■□□□ 1.36
BRF1-216ENST00000550208 PTP4A2Q12974 167 aa23.52■■□□□ 1.36
BRF1-216ENST00000550208 TRIP4Q15650 581 aaPredicted RBP23.52■■□□□ 1.36
BRF1-216ENST00000550208 TOGARAM2Q6ZUX3 1019 aa23.52■■□□□ 1.36
BRF1-216ENST00000550208 ADAM32Q8TC27 787 aa23.52■■□□□ 1.36
BRF1-216ENST00000550208 SLC2A13Q96QE2 648 aa23.52■■□□□ 1.36
BRF1-216ENST00000550208 C11orf70Q9BRQ4 267 aa23.52■■□□□ 1.36
BRF1-216ENST00000550208 LRFN3Q9BTN0 628 aa23.52■■□□□ 1.36
BRF1-216ENST00000550208 DDX23Q9BUQ8 820 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms