RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 MIPP30301 263 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 AMPD2Q01433 879 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 DEUP1Q05D60 604 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 NNTQ13423 1086 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 CLUL1Q15846 466 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 CDO1Q16878 200 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 SYPL2Q5VXT5 272 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 KLHDC10Q6PID8 442 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 PSTKQ8IV42 348 aaKnown RBP18.14■□□□□ 0.49
LETMD1-220ENST00000549686 KATNAL2Q8IYT4 538 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 DQX1Q8TE96 717 aaKnown RBP18.14■□□□□ 0.49
LETMD1-220ENST00000549686 TEKT4Q8WW24 435 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 EDEM1Q92611 657 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 CASP10Q92851 521 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 SERPINB11Q96P15 392 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 NSUN3Q9H649 340 aaKnown RBP18.14■□□□□ 0.49
LETMD1-220ENST00000549686 RNF14Q9UBS8 474 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 USP18Q9UMW8 372 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 HCFC2Q9Y5Z7 792 aa18.14■□□□□ 0.49
LETMD1-220ENST00000549686 COL4A4P53420 1690 aaPredicted RBP18.13■□□□□ 0.49
LETMD1-220ENST00000549686 ZNF840PA6NDX5 716 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 KCNK3O14649 394 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 URI1O94763 535 aaPredicted RBP18.13■□□□□ 0.49
LETMD1-220ENST00000549686 PAPLNO95428 1278 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 TRUB2O95900 331 aaKnown RBP18.13■□□□□ 0.49
LETMD1-220ENST00000549686 IGLV3-25P01717 112 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 EPCAMP16422 314 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 PFKLP17858 780 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 CDC25CP30307 473 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 CETN2P41208 172 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 PEX5P50542 639 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 KPNA1P52294 538 aaPredicted RBP18.13■□□□□ 0.49
LETMD1-220ENST00000549686 HDAC4P56524 1084 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 SLC25A11Q02978 314 aaKnown RBP18.13■□□□□ 0.49
LETMD1-220ENST00000549686 MTA1Q13330 715 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 HECTD3Q5T447 861 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 ARFGAP1Q8N6T3 406 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 GCNAQ96QF7 691 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 OSBPL9Q96SU4 736 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 RRAGDQ9NQL2 400 aaPredicted RBP18.13■□□□□ 0.49
LETMD1-220ENST00000549686 ASAH2Q9NR71 780 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 DDIT4Q9NX09 232 aa18.13■□□□□ 0.49
LETMD1-220ENST00000549686 PACSIN2Q9UNF0 486 aaPredicted RBP18.13■□□□□ 0.49
LETMD1-220ENST00000549686 PER2O15055 1255 aa18.12■□□□□ 0.49
LETMD1-220ENST00000549686 MDM4O15151 490 aa18.12■□□□□ 0.49
LETMD1-220ENST00000549686 SLC2A3P11169 496 aa18.12■□□□□ 0.49
LETMD1-220ENST00000549686 NRIP1P48552 1158 aa18.12■□□□□ 0.49
LETMD1-220ENST00000549686 TAS2R40P59535 323 aa18.12■□□□□ 0.49
LETMD1-220ENST00000549686 ARL13BQ3SXY8 428 aa18.12■□□□□ 0.49
LETMD1-220ENST00000549686 ODF2Q5BJF6 829 aa18.12■□□□□ 0.49
LETMD1-220ENST00000549686 OTUD1Q5VV17 481 aaPredicted RBP18.12■□□□□ 0.49
LETMD1-220ENST00000549686 ADGRD2Q7Z7M1 963 aa18.12■□□□□ 0.49
LETMD1-220ENST00000549686 RBM23Q86U06 439 aaKnown RBP18.12■□□□□ 0.49
LETMD1-220ENST00000549686 TAC4Q86UU9 113 aa18.12■□□□□ 0.49
LETMD1-220ENST00000549686 CMASQ8NFW8 434 aaPredicted RBP18.12■□□□□ 0.49
LETMD1-220ENST00000549686 EXD1Q8NHP7 514 aa18.12■□□□□ 0.49
LETMD1-220ENST00000549686 KRT35Q92764 455 aa18.12■□□□□ 0.49
LETMD1-220ENST00000549686 NTAN1Q96AB6 310 aa18.12■□□□□ 0.49
LETMD1-220ENST00000549686 RBM41Q96IZ5 413 aaKnown RBP18.12■□□□□ 0.49
LETMD1-220ENST00000549686 OSER1Q9NX31 292 aa18.12■□□□□ 0.49
LETMD1-220ENST00000549686 CDC23Q9UJX2 597 aa18.12■□□□□ 0.49
LETMD1-220ENST00000549686 PLXNA3P51805 1871 aa18.12■□□□□ 0.49
LETMD1-220ENST00000549686 SPDYE4A6NLX3 237 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 SOBPA7XYQ1 873 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 IRAK2O43187 625 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 TLR5O60602 858 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 F11P03951 625 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 PTPN2P17706 415 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 CXCR3P49682 368 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 EPHA5P54756 1037 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 COPS2P61201 443 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 NME3Q13232 169 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 EIF4EBP2Q13542 120 aaPredicted RBP18.11■□□□□ 0.49
LETMD1-220ENST00000549686 WHAMMP3Q1A5X7 153 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 BRMS1LQ5PSV4 323 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 C10orf120Q5SQS8 335 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 SH3PXD2AQ5TCZ1 1133 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 SEL1L2Q5TEA6 688 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 SCYL2Q6P3W7 929 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 TMEM184AQ6ZMB5 413 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 CPNE8Q86YQ8 564 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 TMC8Q8IU68 726 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 RCOR2Q8IZ40 523 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 MRPS31Q92665 395 aaKnown RBP18.11■□□□□ 0.49
LETMD1-220ENST00000549686 PRKD2Q9BZL6 878 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 SFXN1Q9H9B4 322 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 IL21Q9HBE4 155 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.11■□□□□ 0.49
LETMD1-220ENST00000549686 ZMYM5Q9UJ78 669 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 DNMT3LQ9UJW3 386 aa18.11■□□□□ 0.49
LETMD1-220ENST00000549686 COLQQ9Y215 455 aaPredicted RBP18.11■□□□□ 0.49
LETMD1-220ENST00000549686 RFXAPO00287 272 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 CCL16O15467 120 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 ZRANB2O95218 330 aaKnown RBP eCLIP18.1■□□□□ 0.49
LETMD1-220ENST00000549686 TFE3P19532 575 aaPredicted RBP18.1■□□□□ 0.49
LETMD1-220ENST00000549686 DDX6P26196 483 aaKnown RBP eCLIP18.1■□□□□ 0.49
LETMD1-220ENST00000549686 ATP5C1P36542 298 aaKnown RBP18.1■□□□□ 0.49
LETMD1-220ENST00000549686 PGFP49763 221 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 DNA2P51530 1060 aa18.1■□□□□ 0.49
LETMD1-220ENST00000549686 ZNF135P52742 658 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms