RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 WASH3PC4AMC7 463 aa17.39■□□□□ 0.37
SSH1-208ENST00000548522 UPK3BL2E5RIL1 263 aa17.39■□□□□ 0.37
SSH1-208ENST00000548522 POLR2DO15514 142 aaKnown RBP17.39■□□□□ 0.37
SSH1-208ENST00000548522 OPHN1O60890 802 aa17.39■□□□□ 0.37
SSH1-208ENST00000548522 ADORA2BP29275 332 aa17.39■□□□□ 0.37
SSH1-208ENST00000548522 DPP6P42658 865 aa17.39■□□□□ 0.37
SSH1-208ENST00000548522 NDST1P52848 882 aa17.39■□□□□ 0.37
SSH1-208ENST00000548522 SNRPFP62306 86 aaKnown RBP17.39■□□□□ 0.37
SSH1-208ENST00000548522 CLDN10P78369 228 aa17.39■□□□□ 0.37
SSH1-208ENST00000548522 KNOP1Q1ED39 458 aaKnown RBP17.39■□□□□ 0.37
SSH1-208ENST00000548522 FOXD4L6Q3SYB3 417 aaPredicted RBP17.39■□□□□ 0.37
SSH1-208ENST00000548522 FOXD4L5Q5VV16 416 aaPredicted RBP17.39■□□□□ 0.37
SSH1-208ENST00000548522 FOXD4L3Q6VB84 417 aaPredicted RBP17.39■□□□□ 0.37
SSH1-208ENST00000548522 SLC36A4Q6YBV0 504 aa17.39■□□□□ 0.37
SSH1-208ENST00000548522 HTR3DQ70Z44 454 aa17.39■□□□□ 0.37
SSH1-208ENST00000548522 CEP76Q8TAP6 659 aa17.39■□□□□ 0.37
SSH1-208ENST00000548522 FOXD4L4Q8WXT5 416 aaPredicted RBP17.39■□□□□ 0.37
SSH1-208ENST00000548522 TWNKQ96RR1 684 aa17.39■□□□□ 0.37
SSH1-208ENST00000548522 GABRG3Q99928 467 aa17.39■□□□□ 0.37
SSH1-208ENST00000548522 NMUR1Q9HB89 426 aa17.39■□□□□ 0.37
SSH1-208ENST00000548522 CSNK1G1Q9HCP0 422 aa17.39■□□□□ 0.37
SSH1-208ENST00000548522 PLK2Q9NYY3 685 aa17.39■□□□□ 0.37
SSH1-208ENST00000548522 FASNP49327 2511 aaKnown RBP17.38■□□□□ 0.37
SSH1-208ENST00000548522 ARHGAP33O14559 1287 aa17.38■□□□□ 0.37
SSH1-208ENST00000548522 CUTAO60888 179 aa17.38■□□□□ 0.37
SSH1-208ENST00000548522 PTMSP20962 102 aa17.38■□□□□ 0.37
SSH1-208ENST00000548522 AFMP43652 599 aa17.38■□□□□ 0.37
SSH1-208ENST00000548522 ASPAP45381 313 aa17.38■□□□□ 0.37
SSH1-208ENST00000548522 RING1Q06587 406 aa17.38■□□□□ 0.37
SSH1-208ENST00000548522 KIAA0895Q8NCT3 520 aa17.38■□□□□ 0.37
SSH1-208ENST00000548522 INTS4Q96HW7 963 aaKnown RBP17.38■□□□□ 0.37
SSH1-208ENST00000548522 MRGPRX1Q96LB2 322 aa17.38■□□□□ 0.37
SSH1-208ENST00000548522 CYLDQ9NQC7 956 aa17.38■□□□□ 0.37
SSH1-208ENST00000548522 MARK1Q9P0L2 795 aa17.38■□□□□ 0.37
SSH1-208ENST00000548522 PCNX2A6NKB5 2137 aa17.38■□□□□ 0.37
SSH1-208ENST00000548522 HHLA1C9JL84 531 aa17.37■□□□□ 0.37
SSH1-208ENST00000548522 TAF4O00268 1085 aa17.37■□□□□ 0.37
SSH1-208ENST00000548522 MAOBP27338 520 aa17.37■□□□□ 0.37
SSH1-208ENST00000548522 PREPLQ4J6C6 727 aaPredicted RBP17.37■□□□□ 0.37
SSH1-208ENST00000548522 KIAA1324Q6UXG2 1013 aaKnown RBP17.37■□□□□ 0.37
SSH1-208ENST00000548522 CLEC20AQ6ZU45 233 aa17.37■□□□□ 0.37
SSH1-208ENST00000548522 TLR8Q9NR97 1041 aaKnown RBP17.37■□□□□ 0.37
SSH1-208ENST00000548522 DNAAF2Q9NVR5 837 aaKnown RBP17.37■□□□□ 0.37
SSH1-208ENST00000548522 COMMD8Q9NX08 183 aa17.37■□□□□ 0.37
SSH1-208ENST00000548522 A0A1W2PQH9 124 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 SH3BP5O60239 455 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 ZNF217O75362 1048 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 GJB3O75712 270 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 YEATS4O95619 227 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 CISD3P0C7P0 127 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 FAM200BP0CF97 657 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 STK4Q13043 487 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 ZACNQ401N2 412 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 C1orf220Q5T0J3 134 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 Q6ZNB5 142 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 CLEC17AQ6ZS10 378 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 RAB44Q7Z6P3 723 aaPredicted RBP17.36■□□□□ 0.37
SSH1-208ENST00000548522 RGL4Q8IZJ4 473 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 CRYBG2Q8N1P7 616 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 XPO6Q96QU8 1125 aaKnown RBP17.36■□□□□ 0.37
SSH1-208ENST00000548522 FBXO44Q9H4M3 255 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 DMAC2Q9NW81 257 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 CGNQ9P2M7 1197 aaKnown RBP17.36■□□□□ 0.37
SSH1-208ENST00000548522 LHX6Q9UPM6 363 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 SCML2Q9UQR0 700 aa17.36■□□□□ 0.37
SSH1-208ENST00000548522 A0A1W2PQD8 194 aa17.35■□□□□ 0.37
SSH1-208ENST00000548522 KLRC4O43908 158 aa17.35■□□□□ 0.37
SSH1-208ENST00000548522 CAPNS1P04632 268 aa17.35■□□□□ 0.37
SSH1-208ENST00000548522 RARGP13631 454 aa17.35■□□□□ 0.37
SSH1-208ENST00000548522 ACO1P21399 889 aaKnown RBP17.35■□□□□ 0.37
SSH1-208ENST00000548522 ATP5C1P36542 298 aaKnown RBP17.35■□□□□ 0.37
SSH1-208ENST00000548522 DGKGP49619 791 aa17.35■□□□□ 0.37
SSH1-208ENST00000548522 GRIK2Q13002 908 aa17.35■□□□□ 0.37
SSH1-208ENST00000548522 PLEKHG6Q3KR16 790 aa17.35■□□□□ 0.37
SSH1-208ENST00000548522 FUT11Q495W5 492 aa17.35■□□□□ 0.37
SSH1-208ENST00000548522 SDE2Q6IQ49 451 aa17.35■□□□□ 0.37
SSH1-208ENST00000548522 NUDT18Q6ZVK8 323 aa17.35■□□□□ 0.37
SSH1-208ENST00000548522 PNPLA1Q8N8W4 532 aa17.35■□□□□ 0.37
SSH1-208ENST00000548522 ZNF419Q96HQ0 510 aaPredicted RBP17.35■□□□□ 0.37
SSH1-208ENST00000548522 ZNF396Q96N95 335 aaPredicted RBP17.35■□□□□ 0.37
SSH1-208ENST00000548522 MAGEF1Q9HAY2 307 aa17.35■□□□□ 0.37
SSH1-208ENST00000548522 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.35■□□□□ 0.37
SSH1-208ENST00000548522 WDR35Q9P2L0 1181 aa17.35■□□□□ 0.37
SSH1-208ENST00000548522 LSM7Q9UK45 103 aaKnown RBP17.35■□□□□ 0.37
SSH1-208ENST00000548522 PVALEFA0A1B0GWK0 134 aa17.34■□□□□ 0.37
SSH1-208ENST00000548522 ASS1P00966 412 aaKnown RBP17.34■□□□□ 0.37
SSH1-208ENST00000548522 KLKB1P03952 638 aa17.34■□□□□ 0.37
SSH1-208ENST00000548522 HSP90AA1P07900 732 aaKnown RBP17.34■□□□□ 0.37
SSH1-208ENST00000548522 PIK3CAP42336 1068 aa17.34■□□□□ 0.37
SSH1-208ENST00000548522 AP3M2P53677 418 aa17.34■□□□□ 0.37
SSH1-208ENST00000548522 NUCB2P80303 420 aa17.34■□□□□ 0.37
SSH1-208ENST00000548522 C10orf120Q5SQS8 335 aa17.34■□□□□ 0.37
SSH1-208ENST00000548522 SV2AQ7L0J3 742 aa17.34■□□□□ 0.37
SSH1-208ENST00000548522 RABEPKQ7Z6M1 372 aa17.34■□□□□ 0.37
SSH1-208ENST00000548522 SCD5Q86SK9 330 aa17.34■□□□□ 0.37
SSH1-208ENST00000548522 CACUL1Q86Y37 369 aa17.34■□□□□ 0.37
SSH1-208ENST00000548522 MKRN2Q9H000 416 aaKnown RBP17.34■□□□□ 0.37
SSH1-208ENST00000548522 KCTD10Q9H3F6 313 aa17.34■□□□□ 0.37
SSH1-208ENST00000548522 APOBEC3GQ9HC16 384 aaKnown RBP17.34■□□□□ 0.37
SSH1-208ENST00000548522 STON1Q9Y6Q2 735 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms