RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 DUOXA2Q1HG44 320 aa14.27□□□□□ -0.13
CCDC59-202ENST00000547758 GPR174Q9BXC1 333 aa14.27□□□□□ -0.13
CCDC59-202ENST00000547758 BBS2Q9BXC9 721 aa14.27□□□□□ -0.13
CCDC59-202ENST00000547758 B3GNT5Q9BYG0 378 aa14.27□□□□□ -0.13
CCDC59-202ENST00000547758 NACA2Q9H009 215 aa14.27□□□□□ -0.13
CCDC59-202ENST00000547758 PRDM16Q9HAZ2 1276 aa14.27□□□□□ -0.13
CCDC59-202ENST00000547758 OLFML3Q9NRN5 406 aa14.27□□□□□ -0.13
CCDC59-202ENST00000547758 WSB2Q9NYS7 404 aaPredicted RBP14.27□□□□□ -0.13
CCDC59-202ENST00000547758 USP36Q9P275 1121 aaKnown RBP14.27□□□□□ -0.13
CCDC59-202ENST00000547758 MYLKQ15746 1914 aa14.27□□□□□ -0.13
CCDC59-202ENST00000547758 GOLGA8CPA6NN73 597 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 WASH3PC4AMC7 463 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 H3BQV1 296 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 BCAT2O15382 392 aaPredicted RBP14.26□□□□□ -0.13
CCDC59-202ENST00000547758 PRPF6O94906 941 aaKnown RBP14.26□□□□□ -0.13
CCDC59-202ENST00000547758 BMP15O95972 392 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 ABCG1P45844 678 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 BNC1Q01954 994 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 CAMK2BQ13554 666 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 ALCAMQ13740 583 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 SURF1Q15526 300 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 HLA-BQ31612 363 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 DCAF12L1Q5VU92 463 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 DBX2Q6ZNG2 339 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 METTL3Q86U44 580 aaKnown RBP14.26□□□□□ -0.13
CCDC59-202ENST00000547758 B3GALNT2Q8NCR0 500 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 CADM4Q8NFZ8 388 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 SCAMP5Q8TAC9 235 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 RHBDD1Q8TEB9 315 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 DNAJC19Q96DA6 116 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 MARK1Q9P0L2 795 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 GMIPQ9P107 970 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 WDR35Q9P2L0 1181 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 STK17AQ9UEE5 414 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 PCDHGB2Q9Y5G2 931 aa14.26□□□□□ -0.13
CCDC59-202ENST00000547758 ATP8B3O60423 1300 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 ZNF233A6NK53 670 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 KIAA0391O15091 583 aaKnown RBP14.25□□□□□ -0.13
CCDC59-202ENST00000547758 GREM1O60565 184 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 FAM163BP0C2L3 166 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 ZDHHC11BP0C7U3 371 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 DGKGP49619 791 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 SLC5A3P53794 718 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 TNNC1P63316 161 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 STARD3Q14849 445 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 FUT11Q495W5 492 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 TPGS1Q6ZTW0 290 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 HTR3DQ70Z44 454 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 TRAPPC11Q7Z392 1133 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 CBWD2Q8IUF1 395 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 WDR49Q8IV35 697 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 KCNK16Q96T55 309 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 FGFBP2Q9BYJ0 223 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 TRIM9Q9C026 710 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 ITM2CQ9NQX7 267 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 IL37Q9NZH6 218 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 STON1Q9Y6Q2 735 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 ZNF462Q96JM2 2506 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 NAV2Q8IVL1 2488 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 CFAP46Q8IYW2 2715 aa14.25□□□□□ -0.13
CCDC59-202ENST00000547758 FAM149AA5PLN7 773 aa14.24□□□□□ -0.13
CCDC59-202ENST00000547758 METTL12A8MUP2 240 aa14.24□□□□□ -0.13
CCDC59-202ENST00000547758 A8MXQ7 604 aa14.24□□□□□ -0.13
CCDC59-202ENST00000547758 KCNJ18B7U540 433 aa14.24□□□□□ -0.13
CCDC59-202ENST00000547758 TK2O00142 265 aa14.24□□□□□ -0.13
CCDC59-202ENST00000547758 TLR5O60602 858 aa14.24□□□□□ -0.13
CCDC59-202ENST00000547758 C1QL1O75973 258 aa14.24□□□□□ -0.13
CCDC59-202ENST00000547758 CISD3P0C7P0 127 aa14.24□□□□□ -0.13
CCDC59-202ENST00000547758 USP49Q70CQ1 688 aa14.24□□□□□ -0.13
CCDC59-202ENST00000547758 FAM35AQ86V20 835 aa14.24□□□□□ -0.13
CCDC59-202ENST00000547758 PIP4K2CQ8TBX8 421 aa14.24□□□□□ -0.13
CCDC59-202ENST00000547758 EPSTI1Q96J88 318 aa14.24□□□□□ -0.13
CCDC59-202ENST00000547758 KIF2CQ99661 725 aa14.24□□□□□ -0.13
CCDC59-202ENST00000547758 MKRN2Q9H000 416 aaKnown RBP14.24□□□□□ -0.13
CCDC59-202ENST00000547758 DMAP1Q9NPF5 467 aaPredicted RBP14.24□□□□□ -0.13
CCDC59-202ENST00000547758 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.24□□□□□ -0.13
CCDC59-202ENST00000547758 EIF2B4Q9UI10 523 aaKnown RBP14.24□□□□□ -0.13
CCDC59-202ENST00000547758 BTBD3Q9Y2F9 522 aa14.24□□□□□ -0.13
CCDC59-202ENST00000547758 TENM4Q6N022 2769 aa14.23□□□□□ -0.13
CCDC59-202ENST00000547758 FAM92AA1XBS5 289 aa14.23□□□□□ -0.13
CCDC59-202ENST00000547758 CST3P01034 146 aaPredicted RBP14.23□□□□□ -0.13
CCDC59-202ENST00000547758 IDEP14735 1019 aa14.23□□□□□ -0.13
CCDC59-202ENST00000547758 OXTRP30559 389 aa14.23□□□□□ -0.13
CCDC59-202ENST00000547758 TPMTP51580 245 aa14.23□□□□□ -0.13
CCDC59-202ENST00000547758 SUZ12Q15022 739 aaKnown RBP14.23□□□□□ -0.13
CCDC59-202ENST00000547758 SMAD1Q15797 465 aaKnown RBP14.23□□□□□ -0.13
CCDC59-202ENST00000547758 WDR72Q3MJ13 1102 aa14.23□□□□□ -0.13
CCDC59-202ENST00000547758 DMRTA1Q5VZB9 504 aa14.23□□□□□ -0.13
CCDC59-202ENST00000547758 SV2BQ7L1I2 683 aa14.23□□□□□ -0.13
CCDC59-202ENST00000547758 MED10Q9BTT4 135 aa14.23□□□□□ -0.13
CCDC59-202ENST00000547758 KLF16Q9BXK1 252 aaPredicted RBP14.23□□□□□ -0.13
CCDC59-202ENST00000547758 COMMD8Q9NX08 183 aa14.23□□□□□ -0.13
CCDC59-202ENST00000547758 CCDC39Q9UFE4 941 aa14.23□□□□□ -0.13
CCDC59-202ENST00000547758 LSM7Q9UK45 103 aaKnown RBP14.23□□□□□ -0.13
CCDC59-202ENST00000547758 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCDC59-202ENST00000547758 COL5A1P20908 1838 aaPredicted RBP14.22□□□□□ -0.13
CCDC59-202ENST00000547758 A0A1B0GVT2 93 aa14.22□□□□□ -0.13
CCDC59-202ENST00000547758 FRMD3A2A2Y4 597 aa14.22□□□□□ -0.13
CCDC59-202ENST00000547758 E9PAM4 449 aa14.22□□□□□ -0.13
CCDC59-202ENST00000547758 ATXN7O15265 892 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms