RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 TCP11L2Q8N4U5 519 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 PDPRQ8NCN5 879 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 CENPIQ92674 756 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-210ENST00000547654 MAELQ96JY0 434 aaKnown RBP4.81□□□□□ -1.64
SCAF11-210ENST00000547654 PRPF18Q99633 342 aaKnown RBP4.81□□□□□ -1.64
SCAF11-210ENST00000547654 CHCHD6Q9BRQ6 235 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 KATNAL1Q9BW62 490 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 ZNF518BQ9C0D4 1074 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 RSPH9Q9H1X1 276 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-210ENST00000547654 SLAMF7Q9NQ25 335 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 AGAP1Q9UPQ3 857 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 MED16Q9Y2X0 877 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 TMX2Q9Y320 296 aa4.81□□□□□ -1.64
SCAF11-210ENST00000547654 FNDC1Q4ZHG4 1894 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-210ENST00000547654 A0A0B4J269 797 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 MBD3L4A6NDZ8 208 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-210ENST00000547654 MBD3L3A6NE82 208 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-210ENST00000547654 ASNA1O43681 348 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 CELA2AP08217 269 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 VDRP11473 427 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 WT1P19544 449 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-210ENST00000547654 ITPKBP27987 946 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 DYRK1AQ13627 763 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 CCNG2Q16589 344 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 SLC45A4Q5BKX6 768 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 GPATCH4Q5T3I0 446 aaKnown RBP4.8□□□□□ -1.64
SCAF11-210ENST00000547654 EMC10Q5UCC4 262 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 KAZNQ674X7 775 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 LMBRD2Q68DH5 695 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-210ENST00000547654 ZNF425Q6IV72 752 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 LIN54Q6MZP7 749 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 CCDC117Q8IWD4 279 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-210ENST00000547654 PCSK9Q8NBP7 692 aaKnown RBP4.8□□□□□ -1.64
SCAF11-210ENST00000547654 STT3BQ8TCJ2 826 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 THAP4Q8WY91 577 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 HTRA1Q92743 480 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 FBXL20Q96IG2 436 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 AP1M1Q9BXS5 423 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 DHX36Q9H2U1 1008 aaKnown RBP4.8□□□□□ -1.64
SCAF11-210ENST00000547654 PRKRIP1Q9H875 184 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-210ENST00000547654 TBC1D23Q9NUY8 699 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 AASSQ9UDR5 926 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 HERC5Q9UII4 1024 aaKnown RBP4.8□□□□□ -1.64
SCAF11-210ENST00000547654 ZDHHC8Q9ULC8 765 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 WNT6Q9Y6F9 365 aa4.8□□□□□ -1.64
SCAF11-210ENST00000547654 WIPF3A6NGB9 483 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 TISP43B9A030 160 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 B9A039 149 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 E7ENX8 843 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 PYCARD-AS1I3L0S3 204 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 MYO1CO00159 1063 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 RASSF9O75901 435 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 ANXA1P04083 346 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 RPN1P04843 607 aaKnown RBP4.79□□□□□ -1.64
SCAF11-210ENST00000547654 GNAI2P04899 355 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 HDCP19113 662 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 PCSK6P29122 969 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 ADD2P35612 726 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 KRT20P35900 424 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 RAD52P43351 418 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 ANXA11P50995 505 aaKnown RBP4.79□□□□□ -1.64
SCAF11-210ENST00000547654 VAMP2P63027 116 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 TAP2Q03519 686 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 UBE3AQ05086 875 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 EFR3AQ14156 821 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 KIF22Q14807 665 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 ALDH1L2Q3SY69 923 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 SPECC1Q5M775 1068 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 TMCO3Q6UWJ1 677 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-210ENST00000547654 AMIGO2Q86SJ2 522 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 YAF2Q8IY57 180 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 ADGRG5Q8IZF4 528 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 AFG1LQ8WV93 481 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 HERVK_113Q902F9 699 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 LPIN2Q92539 896 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 MAML1Q92585 1016 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 TMEM125Q96AQ2 219 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 SNX27Q96L92 541 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 SDF4Q9BRK5 362 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 CENPOQ9BU64 300 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 C1orf43Q9BWL3 253 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 DPH1Q9BZG8 443 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 TMEM8AQ9HCN3 771 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 HEYLQ9NQ87 328 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-210ENST00000547654 SMYD2Q9NRG4 433 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 RLIMQ9NVW2 624 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 NSMCE4AQ9NXX6 385 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 RGL1Q9NZL6 768 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 IGSF9Q9P2J2 1179 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 SRP68Q9UHB9 627 aaKnown RBP4.79□□□□□ -1.64
SCAF11-210ENST00000547654 FEM1BQ9UK73 627 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 ARHGAP26Q9UNA1 814 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 SCRIBQ14160 1630 aa4.79□□□□□ -1.64
SCAF11-210ENST00000547654 WDR62O43379 1518 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 A0A087X0M5 115 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 A0A1B0GX30 115 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 F5H0A9 414 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-210ENST00000547654 FCHO1O14526 889 aa4.78□□□□□ -1.64
SCAF11-210ENST00000547654 MPPED1O15442 326 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 551.8 ms