RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 FMO1Q01740 532 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 SPEM2Q0P670 501 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 CSRP2Q16527 193 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 DENND1BQ6P3S1 775 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 TRIM72Q6ZMU5 477 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 PAQR9Q6ZVX9 377 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 CEP68Q76N32 757 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 TTC30AQ86WT1 665 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 TMC8Q8IU68 726 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 TTC9BQ8N6N2 239 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 ANKRD52Q8NB46 1076 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 PPP1R9BQ96SB3 815 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 BAG1Q99933 345 aaPredicted RBP12.7□□□□□ -0.38
HDAC7-226ENST00000547259 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.7□□□□□ -0.38
HDAC7-226ENST00000547259 LRRC3Q9BY71 257 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 DUSP16Q9BY84 665 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 TASP1Q9H6P5 420 aa12.7□□□□□ -0.38
HDAC7-226ENST00000547259 DMAP1Q9NPF5 467 aaPredicted RBP12.7□□□□□ -0.38
HDAC7-226ENST00000547259 MAP1BP46821 2468 aaKnown RBP12.69□□□□□ -0.38
HDAC7-226ENST00000547259 DENND4CQ5VZ89 1909 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 SSU72P8A0A1W2PR75 194 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 SPECC1L-ADORA2AF8WAN1 911 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 TRIM66O15016 1216 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 AKR1B10O60218 316 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 LSM8O95777 96 aaKnown RBP12.69□□□□□ -0.38
HDAC7-226ENST00000547259 DDX6P26196 483 aaKnown RBP eCLIP12.69□□□□□ -0.38
HDAC7-226ENST00000547259 GABRR2P28476 465 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 CTHP32929 405 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 CACNA2D1P54289 1103 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 MAP3K7CLP57077 242 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 SATB1Q01826 763 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 PDE4CQ08493 712 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 MAPK8IP2Q13387 824 aaPredicted RBP12.69□□□□□ -0.38
HDAC7-226ENST00000547259 ITPRIPL2Q3MIP1 535 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 GPR158Q5T848 1215 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 VSTM1Q6UX27 236 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 CLEC20AQ6ZU45 233 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 TMTC1Q8IUR5 882 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 TMEM35BQ8NCS4 154 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 C1orf131Q8NDD1 294 aaKnown RBP12.69□□□□□ -0.38
HDAC7-226ENST00000547259 BPIFB1Q8TDL5 484 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 LOXL4Q96JB6 756 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 CCDC42Q96M95 316 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 CHP1Q99653 195 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 SYT11Q9BT88 431 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 CRISPLD1Q9H336 500 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 NHEJ1Q9H9Q4 299 aaPredicted RBP12.69□□□□□ -0.38
HDAC7-226ENST00000547259 SEMA4GQ9NTN9 838 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 SLC27A5Q9Y2P5 690 aa12.69□□□□□ -0.38
HDAC7-226ENST00000547259 FAM170AA1A519 330 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 SLC38A8A6NNN8 435 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 F8VP50 259 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 XPO1O14980 1071 aaKnown RBP12.68□□□□□ -0.38
HDAC7-226ENST00000547259 SOAT2O75908 522 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 ADRB1P08588 477 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 FECHP22830 423 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 CYLC1P35663 651 aaPredicted RBP12.68□□□□□ -0.38
HDAC7-226ENST00000547259 GPR15P49685 360 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 KIF11P52732 1056 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 RPL10AP62906 217 aaKnown RBP12.68□□□□□ -0.38
HDAC7-226ENST00000547259 NOMO3P69849 1222 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 CLEC16AQ2KHT3 1053 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 PKDCCQ504Y2 493 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 NAA35Q5VZE5 725 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 PRR23CQ6ZRP0 262 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 GAREM2Q75VX8 874 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 WDR5BQ86VZ2 330 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 LRRC8AQ8IWT6 810 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 MSANTD4Q8NCY6 345 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 CCDC112Q8NEF3 446 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 NOX5Q96PH1 765 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 PCDHB18PQ96TA0 734 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 SMOQ99835 787 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 LHX5Q9H2C1 402 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 CSNK1G1Q9HCP0 422 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 PARD6AQ9NPB6 346 aa12.68□□□□□ -0.38
HDAC7-226ENST00000547259 KMT2BQ9UMN6 2715 aaPredicted RBP12.68□□□□□ -0.38
HDAC7-226ENST00000547259 ATG2BQ96BY7 2078 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-226ENST00000547259 DCDC2BA2VCK2 349 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 SOWAHDA6NJG2 315 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 TMCO5BA8MYB1 307 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 CHURC1-FNTBB4DL54 471 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 TULP2O00295 520 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 DDX3XO00571 662 aaKnown RBP eCLIP12.67□□□□□ -0.38
HDAC7-226ENST00000547259 HRO43593 1189 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 BEST1O76090 585 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 CYP1A1P04798 512 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-226ENST00000547259 CDH5P33151 784 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-226ENST00000547259 AVPR1AP37288 418 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 GPD2P43304 727 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 NSFP46459 744 aaKnown RBP12.67□□□□□ -0.38
HDAC7-226ENST00000547259 PLA2G4AP47712 749 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 FNTBP49356 437 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 RGS7P49802 495 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 GFPT1Q06210 699 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-226ENST00000547259 GRSF1Q12849 480 aaKnown RBP eCLIP12.67□□□□□ -0.38
HDAC7-226ENST00000547259 CCINQ13939 588 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 LPAL2Q16609 132 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 DDR2Q16832 855 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms