RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 RFC4P35249 363 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 KRT20P35900 424 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 IL15P40933 162 aaPredicted RBP3.9□□□□□ -1.79
CUL3-215ENST00000546102 STAT5BP51692 787 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 PDE1AP54750 535 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 DCAF7P61962 342 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 DLX2Q07687 328 aaPredicted RBP3.9□□□□□ -1.79
CUL3-215ENST00000546102 SMAD4Q13485 552 aaKnown RBP3.9□□□□□ -1.79
CUL3-215ENST00000546102 KRT32Q14532 448 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 HLFQ16534 295 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 CCDC152Q4G0S7 254 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 FAM133BQ5BKY9 247 aaKnown RBP3.9□□□□□ -1.79
CUL3-215ENST00000546102 SPECC1Q5M775 1068 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 TSHZ3Q63HK5 1081 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 ARL6IP4Q66PJ3 421 aaKnown RBP3.9□□□□□ -1.79
CUL3-215ENST00000546102 DPP8Q6V1X1 898 aaPredicted RBP3.9□□□□□ -1.79
CUL3-215ENST00000546102 KRT77Q7Z794 578 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 AACSQ86V21 672 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 ZC3H18Q86VM9 953 aaKnown RBP3.9□□□□□ -1.79
CUL3-215ENST00000546102 ZNF34Q8IZ26 560 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 CNTROBQ8N137 903 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 LILRA3Q8N6C8 439 aaPredicted RBP3.9□□□□□ -1.79
CUL3-215ENST00000546102 DNAJC5GQ8N7S2 189 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 OR1N1Q8NGS0 311 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 ADAMTS18Q8TE60 1221 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 IPCEF1Q8WWN9 437 aaPredicted RBP3.9□□□□□ -1.79
CUL3-215ENST00000546102 NKD2Q969F2 451 aaPredicted RBP3.9□□□□□ -1.79
CUL3-215ENST00000546102 KAZALD1Q96I82 304 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 RSRC1Q96IZ7 334 aaKnown RBP3.9□□□□□ -1.79
CUL3-215ENST00000546102 ZSWIM3Q96MP5 696 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 CDK5RAP1Q96SZ6 601 aaKnown RBP3.9□□□□□ -1.79
CUL3-215ENST00000546102 RBM15Q96T37 977 aaKnown RBP eCLIP3.9□□□□□ -1.79
CUL3-215ENST00000546102 C1QTNF3Q9BXJ4 246 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 C11orf54Q9H0W9 315 aaPredicted RBP3.9□□□□□ -1.79
CUL3-215ENST00000546102 SIL1Q9H173 461 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 TMEM8AQ9HCN3 771 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 SEPSECSQ9HD40 501 aaKnown RBP3.9□□□□□ -1.79
CUL3-215ENST00000546102 IL1RAPL2Q9NP60 686 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 A1CFQ9NQ94 594 aaKnown RBP3.9□□□□□ -1.79
CUL3-215ENST00000546102 KCND1Q9NSA2 647 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 ANKEF1Q9NU02 776 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 SIDT1Q9NXL6 827 aaKnown RBP3.9□□□□□ -1.79
CUL3-215ENST00000546102 CDC42EP3Q9UKI2 254 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 ARHGAP26Q9UNA1 814 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 PLA2G2DQ9UNK4 145 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 NIP7Q9Y221 180 aaKnown RBP eCLIP3.9□□□□□ -1.79
CUL3-215ENST00000546102 TTLL3Q9Y4R7 772 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 HS3ST4Q9Y661 456 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 SPEF2Q9C093 1822 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 UBN2Q6ZU65 1347 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 SALL3Q9BXA9 1300 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 UBR3Q6ZT12 1888 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 ARAP2Q8WZ64 1704 aa3.9□□□□□ -1.79
CUL3-215ENST00000546102 RTL9Q8NET4 1388 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 MYH14Q7Z406 1995 aaKnown RBP3.89□□□□□ -1.79
CUL3-215ENST00000546102 A0A087X0M5 115 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 A0A0G2JNJ9 132 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 A0A1B0GX30 115 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 A0A1W2PRQ8 180 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 MROH6A6NGR9 719 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 PRSS29PA6NIE9 313 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 HIP1O00291 1037 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 ZBED4O75132 1171 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 ITGA10O75578 1167 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 ALDH1A2O94788 518 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 ACTL6BO94805 426 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 NTSR2O95665 410 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 RAP2AP10114 183 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 ALOX15P16050 662 aaPredicted RBP3.89□□□□□ -1.79
CUL3-215ENST00000546102 NPPBP16860 134 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 MCCP23508 829 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 CRHR1P34998 444 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 ALDH1A3P47895 512 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 SLC11A2P49281 568 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 CCR5P51681 352 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 COPAP53621 1224 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 SEC24CP53992 1094 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 PNLIPRP1P54315 467 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 NAP1L1P55209 391 aaKnown RBP3.89□□□□□ -1.79
CUL3-215ENST00000546102 UBE3AQ05086 875 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 EFR3AQ14156 821 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 KIF22Q14807 665 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 CCNG2Q16589 344 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 TBC1D10BQ4KMP7 808 aaPredicted RBP3.89□□□□□ -1.79
CUL3-215ENST00000546102 PABPC1LQ4VXU2 614 aaKnown RBP3.89□□□□□ -1.79
CUL3-215ENST00000546102 TMTC4Q5T4D3 741 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 C1QTNF12Q5T7M4 302 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 FAM205BPQ63HN1 556 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 HAUS3Q68CZ6 603 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 TMEM200BQ69YZ2 307 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 CRTC1Q6UUV9 634 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 ZDHHC24Q6UX98 284 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 NEK10Q6ZWH5 1172 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 RRAGAQ7L523 313 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 CXXC5Q7LFL8 322 aaKnown RBP3.89□□□□□ -1.79
CUL3-215ENST00000546102 PLEKHH3Q7Z736 793 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 GALNT5Q7Z7M9 940 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 PLXDC1Q8IUK5 500 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 YAF2Q8IY57 180 aa3.89□□□□□ -1.79
CUL3-215ENST00000546102 SCAMP5Q8TAC9 235 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms