RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 NIF3L1Q9GZT8 377 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 PXMP2Q9NR77 195 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 TJP2Q9UDY2 1190 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 POMPQ9Y244 141 aa14.71□□□□□ -0.05
SRP54-202ENST00000546080 SCN9AQ15858 1988 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.7□□□□□ -0.06
SRP54-202ENST00000546080 LRRIQ4A6NIV6 560 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 K7ERI5 159 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 CASQ2O14958 399 aaPredicted RBP14.7□□□□□ -0.06
SRP54-202ENST00000546080 PEX1O43933 1283 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 SIN3BO75182 1162 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 LYPLA1O75608 230 aaPredicted RBP14.7□□□□□ -0.06
SRP54-202ENST00000546080 PSAPP07602 524 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 SMIM18P0DKX4 95 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 MIPP30301 263 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 L1CAMP32004 1257 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 SP4Q02446 784 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 BTKQ06187 659 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 MMRN1Q13201 1228 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 TTLL12Q14166 644 aaPredicted RBP14.7□□□□□ -0.06
SRP54-202ENST00000546080 DBN1Q16643 649 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 TCHHL1Q5QJ38 904 aaPredicted RBP14.7□□□□□ -0.06
SRP54-202ENST00000546080 FAM182AQ5T1J6 154 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 FAXCQ5TGI0 409 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 SCARA5Q6ZMJ2 495 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 NCAPG2Q86XI2 1143 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 DEPTORQ8TB45 409 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 PRICKLE1Q96MT3 831 aaPredicted RBP14.7□□□□□ -0.06
SRP54-202ENST00000546080 ZNF778Q96MU6 729 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 GCNAQ96QF7 691 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 MAP3K20Q9NYL2 800 aaKnown RBP14.7□□□□□ -0.06
SRP54-202ENST00000546080 USP18Q9UMW8 372 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 G3BP2Q9UN86 482 aaKnown RBP14.7□□□□□ -0.06
SRP54-202ENST00000546080 DTNAQ9Y4J8 743 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 CLRN2A0PK11 232 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 KCNN4O15554 427 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 HNRNPRO43390 633 aaKnown RBP14.7□□□□□ -0.06
SRP54-202ENST00000546080 ITM2AO43736 263 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 STK10O94804 968 aaKnown RBP14.7□□□□□ -0.06
SRP54-202ENST00000546080 TOP3BO95985 862 aaKnown RBP14.7□□□□□ -0.06
SRP54-202ENST00000546080 PIGRP01833 764 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 FAM200BP0CF97 657 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 SLC1A6P48664 564 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 SERPINB9P50453 376 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 INHBCP55103 352 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 MYL6P60660 151 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 YWHAEP62258 255 aaKnown RBP14.7□□□□□ -0.06
SRP54-202ENST00000546080 USP4Q13107 963 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 CBLBQ13191 982 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 TMEM259Q4ZIN3 620 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 B3GNT6Q6ZMB0 384 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 RBM44Q6ZP01 1051 aaKnown RBP14.7□□□□□ -0.06
SRP54-202ENST00000546080 RTKN2Q8IZC4 609 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 DEFB107AQ8IZN7 70 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.7□□□□□ -0.06
SRP54-202ENST00000546080 CMTM5Q96DZ9 223 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 SHCBP1LQ9BZQ2 653 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 KLC2Q9H0B6 622 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 NRDE2Q9H7Z3 1164 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 FBXO40Q9UH90 709 aa14.7□□□□□ -0.06
SRP54-202ENST00000546080 CCDC160A6NGH7 325 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 TTLL13PA6NNM8 815 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 TRUB2O95900 331 aaKnown RBP14.69□□□□□ -0.06
SRP54-202ENST00000546080 APRTP07741 180 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 FDFT1P37268 417 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 RPL5P46777 297 aaKnown RBP14.69□□□□□ -0.06
SRP54-202ENST00000546080 RPL10AP62906 217 aaKnown RBP14.69□□□□□ -0.06
SRP54-202ENST00000546080 EMC2Q15006 297 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 FAM47CQ5HY64 1035 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 PDPK2PQ6A1A2 396 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 C1orf228Q6PIY5 440 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 UNC5AQ6ZN44 842 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 TMC7Q7Z402 723 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 RSPH3Q86UC2 560 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 CAND1Q86VP6 1230 aaKnown RBP14.69□□□□□ -0.06
SRP54-202ENST00000546080 HPS6Q86YV9 775 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 ADGRF2Q8IZF7 708 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 DEPDC1BQ8WUY9 529 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 TMEM143Q96AN5 459 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 Q9H521 79 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 FAM96AQ9H5X1 160 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 DHX33Q9H6R0 707 aaKnown RBP14.69□□□□□ -0.06
SRP54-202ENST00000546080 PLAC1Q9HBJ0 212 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 INPP5FQ9Y2H2 1132 aa14.69□□□□□ -0.06
SRP54-202ENST00000546080 CAPN8A6NHC0 703 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 SLC15A5A6NIM6 579 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 CLPTM1O96005 669 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 CD19P15391 556 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 ITGAXP20702 1163 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 GABRB2P47870 512 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 AP3M2P53677 418 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 CDH6P55285 790 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 TGFB2P61812 414 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 DEUP1Q05D60 604 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 TBL3Q12788 808 aaKnown RBP14.68□□□□□ -0.06
SRP54-202ENST00000546080 TFDP2Q14188 446 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 TEDDM1Q5T9Z0 273 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 OGFRL1Q5TC84 451 aaPredicted RBP14.68□□□□□ -0.06
SRP54-202ENST00000546080 MBLAC2Q68D91 279 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 FBXW8Q8N3Y1 598 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms