RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 C2CD4BA6NLJ0 364 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 NRG2O14511 850 aaPredicted RBP11.25□□□□□ -0.61
PAAF1-216ENST00000546039 COCHO43405 550 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 FYNP06241 537 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 CKMP06732 381 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 WEE1P30291 646 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 ATP5C1P36542 298 aaKnown RBP11.25□□□□□ -0.61
PAAF1-216ENST00000546039 FLT3P36888 993 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 RNASE9P60153 205 aaKnown RBP11.25□□□□□ -0.61
PAAF1-216ENST00000546039 NNTQ13423 1086 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 MAMLD1Q13495 774 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 SMAD2Q15796 467 aaKnown RBP11.25□□□□□ -0.61
PAAF1-216ENST00000546039 DCAF6Q58WW2 860 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 STXBP5Q5T5C0 1151 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 PTCRAQ6ISU1 281 aaPredicted RBP11.25□□□□□ -0.61
PAAF1-216ENST00000546039 OTOP3Q7RTS5 596 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 PHLDB2Q86SQ0 1253 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 RHOT2Q8IXI1 618 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 CMTM8Q8IZV2 173 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 DEFB106AQ8N104 65 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 PIAS4Q8N2W9 510 aaPredicted RBP11.25□□□□□ -0.61
PAAF1-216ENST00000546039 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.25□□□□□ -0.61
PAAF1-216ENST00000546039 DQX1Q8TE96 717 aaKnown RBP11.25□□□□□ -0.61
PAAF1-216ENST00000546039 RFFLQ8WZ73 363 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 EDEM1Q92611 657 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 FGF13Q92913 245 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 KHSRPQ92945 711 aaKnown RBP eCLIP11.25□□□□□ -0.61
PAAF1-216ENST00000546039 ARHGEF26Q96DR7 871 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 SERPINB11Q96P15 392 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 DESI2Q9BSY9 194 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 NUP85Q9BW27 656 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 PHF7Q9BWX1 381 aaPredicted RBP11.25□□□□□ -0.61
PAAF1-216ENST00000546039 SMOC2Q9H3U7 446 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 KIF9Q9HAQ2 790 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 TMEM51Q9NW97 253 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 MARCH2Q9P0N8 246 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 LCMT1Q9UIC8 334 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 DNMT3LQ9UJW3 386 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 NAALADL1Q9UQQ1 740 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 USTQ9Y2C2 406 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 REXO2Q9Y3B8 237 aaKnown RBP11.25□□□□□ -0.61
PAAF1-216ENST00000546039 TICRRQ7Z2Z1 1910 aa11.25□□□□□ -0.61
PAAF1-216ENST00000546039 A0A0A6YYK5 440 aaPredicted RBP11.24□□□□□ -0.61
PAAF1-216ENST00000546039 DPYSL4O14531 572 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 PJA2O43164 708 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 MTA2O94776 668 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 GJB6O95452 261 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 CCDC175P0C221 793 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 MBL2P11226 248 aaPredicted RBP11.24□□□□□ -0.61
PAAF1-216ENST00000546039 PDGFRAP16234 1089 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 HDCP19113 662 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 GPD1P21695 349 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 SDC4P31431 198 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 GBP2P32456 591 aaPredicted RBP11.24□□□□□ -0.61
PAAF1-216ENST00000546039 RFC1P35251 1148 aaPredicted RBP11.24□□□□□ -0.61
PAAF1-216ENST00000546039 AVPR1AP37288 418 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 PTPN9P43378 593 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 KPNA1P52294 538 aaPredicted RBP11.24□□□□□ -0.61
PAAF1-216ENST00000546039 SLC7A9P82251 487 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 EFEMP1Q12805 493 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 TCEAL1Q15170 157 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 DDX42Q86XP3 938 aaKnown RBP eCLIP11.24□□□□□ -0.61
PAAF1-216ENST00000546039 EMC1Q8N766 993 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 ARL14EPQ8N8R7 260 aaPredicted RBP11.24□□□□□ -0.61
PAAF1-216ENST00000546039 TDRD5Q8NAT2 981 aaKnown RBP11.24□□□□□ -0.61
PAAF1-216ENST00000546039 JOSD2Q8TAC2 188 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 ZNF564Q8TBZ8 553 aaPredicted RBP11.24□□□□□ -0.61
PAAF1-216ENST00000546039 FNIP1Q8TF40 1166 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 ACSF2Q96CM8 615 aaPredicted RBP11.24□□□□□ -0.61
PAAF1-216ENST00000546039 MYADMQ96S97 322 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 NPY6RQ99463 290 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 DDX23Q9BUQ8 820 aaKnown RBP11.24□□□□□ -0.61
PAAF1-216ENST00000546039 SLC46A2Q9BY10 475 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 FAM204AQ9H8W3 233 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 PRDM6Q9NQX0 595 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 CTTNBP2NLQ9P2B4 639 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 RASAL2Q9UJF2 1139 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 ARHGAP26Q9UNA1 814 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 HBS1LQ9Y450 684 aaKnown RBP11.24□□□□□ -0.61
PAAF1-216ENST00000546039 NR2E1Q9Y466 385 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 ADGRG1Q9Y653 693 aa11.24□□□□□ -0.61
PAAF1-216ENST00000546039 PRUNE2Q8WUY3 3088 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 C5orf42Q9H799 3197 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 TMEM191CA6NGB0 347 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 BTNL10A8MVZ5 291 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 IRAK2O43187 625 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 TRUB2O95900 331 aaKnown RBP11.23□□□□□ -0.61
PAAF1-216ENST00000546039 IGLV3-25P01717 112 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 TCF3P15923 654 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 GBP1P32455 592 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 SULT1E1P49888 294 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 ZNF143P52747 638 aaPredicted RBP11.23□□□□□ -0.61
PAAF1-216ENST00000546039 HADHBP55084 474 aaKnown RBP11.23□□□□□ -0.61
PAAF1-216ENST00000546039 RPL7AP62424 266 aaKnown RBP11.23□□□□□ -0.61
PAAF1-216ENST00000546039 COG7P83436 770 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 TFF2Q03403 129 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 USP4Q13107 963 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 TRIP4Q15650 581 aaPredicted RBP11.23□□□□□ -0.61
PAAF1-216ENST00000546039 SLC25A52Q3SY17 297 aa11.23□□□□□ -0.61
PAAF1-216ENST00000546039 SYPL2Q5VXT5 272 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms