RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 EFHC1Q5JVL4 640 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 MSANTD2Q6P1R3 559 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 WDR59Q6PJI9 974 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 TOGARAM2Q6ZUX3 1019 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 SLC26A9Q7LBE3 791 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 MIB1Q86YT6 1006 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 YAF2Q8IY57 180 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 POPDC2Q9HBU9 364 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 SLC2A4RGQ9NR83 387 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 MARCH2Q9P0N8 246 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 ARHGAP20Q9P2F6 1191 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 TICRRQ7Z2Z1 1910 aa21.42■■□□□ 1.02
HMGA2-211ENST00000545998 AKR1B15C9JRZ8 316 aaPredicted RBP21.41■■□□□ 1.02
HMGA2-211ENST00000545998 CHADO15335 359 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 HSF2BPO75031 334 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 PLEKP08567 350 aaPredicted RBP21.41■■□□□ 1.02
HMGA2-211ENST00000545998 NCAM1P13591 858 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 SCNN1AP37088 669 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 ARHGAP29Q52LW3 1261 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 ACAD10Q6JQN1 1059 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 MON1BQ7L1V2 547 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 CNGA4Q8IV77 575 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 KIAA1958Q8N8K9 716 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 TTC16Q8NEE8 873 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 ASIC4Q96FT7 647 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 SLC2A13Q96QE2 648 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 C11orf70Q9BRQ4 267 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 THG1LQ9NWX6 298 aaKnown RBP21.41■■□□□ 1.02
HMGA2-211ENST00000545998 TAS2R14Q9NYV8 317 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 ADAM22Q9P0K1 906 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 CFAP97Q9P2B7 532 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 RASAL2Q9UJF2 1139 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 NAALADL1Q9UQQ1 740 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 COL4A2P08572 1712 aa21.41■■□□□ 1.02
HMGA2-211ENST00000545998 ARNTLO00327 626 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 ZNF263O14978 683 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 ADCY5O95622 1261 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 ZFYVE19Q96K21 471 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 STRIP2Q9ULQ0 834 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 TECTAO75443 2155 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 E2F8A0AVK6 867 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 CAPN9O14815 690 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 GREM1O60565 184 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 GRAP2O75791 330 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 GZMAP12544 262 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 CDC25BP30305 580 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 GSCP56915 257 aaPredicted RBP21.4■■□□□ 1.02
HMGA2-211ENST00000545998 COG7P83436 770 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 C1QBPQ07021 282 aaKnown RBP21.4■■□□□ 1.02
HMGA2-211ENST00000545998 FAM102AQ5T9C2 384 aaPredicted RBP21.4■■□□□ 1.02
HMGA2-211ENST00000545998 SYPL2Q5VXT5 272 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 PPP1R2P3Q6NXS1 205 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 EDAQ92838 391 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 IRF7Q92985 503 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 WBP2Q969T9 261 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 FAM83CQ9BQN1 747 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 BRD9Q9H8M2 597 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 SFMBT1Q9UHJ3 866 aa21.4■■□□□ 1.02
HMGA2-211ENST00000545998 PI4K2BG5E9Z4 385 aa21.39■■□□□ 1.01
HMGA2-211ENST00000545998 CALB1P05937 261 aa21.39■■□□□ 1.01
HMGA2-211ENST00000545998 IRF1P10914 325 aa21.39■■□□□ 1.01
HMGA2-211ENST00000545998 ALADP13716 330 aa21.39■■□□□ 1.01
HMGA2-211ENST00000545998 TSR1Q2NL82 804 aaKnown RBP21.39■■□□□ 1.01
HMGA2-211ENST00000545998 CC2D1AQ6P1N0 951 aaPredicted RBP21.39■■□□□ 1.01
HMGA2-211ENST00000545998 TC2NQ8N9U0 490 aa21.39■■□□□ 1.01
HMGA2-211ENST00000545998 DQX1Q8TE96 717 aaKnown RBP21.39■■□□□ 1.01
HMGA2-211ENST00000545998 OSCP1Q8WVF1 389 aa21.39■■□□□ 1.01
HMGA2-211ENST00000545998 TRPV5Q9NQA5 729 aa21.39■■□□□ 1.01
HMGA2-211ENST00000545998 ZNHIT6Q9NWK9 470 aaKnown RBP21.39■■□□□ 1.01
HMGA2-211ENST00000545998 ADAMTS1Q9UHI8 967 aa21.39■■□□□ 1.01
HMGA2-211ENST00000545998 F5P12259 2224 aa21.38■■□□□ 1.01
HMGA2-211ENST00000545998 SLC12A8A0AV02 714 aa21.38■■□□□ 1.01
HMGA2-211ENST00000545998 TMCO5BA8MYB1 307 aa21.38■■□□□ 1.01
HMGA2-211ENST00000545998 GOLGA8SH3BPF8 625 aa21.38■■□□□ 1.01
HMGA2-211ENST00000545998 DAB1O75553 588 aa21.38■■□□□ 1.01
HMGA2-211ENST00000545998 STC2O76061 302 aa21.38■■□□□ 1.01
HMGA2-211ENST00000545998 VPS36Q86VN1 386 aa21.38■■□□□ 1.01
HMGA2-211ENST00000545998 MCOLN2Q8IZK6 566 aa21.38■■□□□ 1.01
HMGA2-211ENST00000545998 DEFB106AQ8N104 65 aa21.38■■□□□ 1.01
HMGA2-211ENST00000545998 DNASE1L2Q92874 299 aa21.38■■□□□ 1.01
HMGA2-211ENST00000545998 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.38■■□□□ 1.01
HMGA2-211ENST00000545998 WDR35Q9P2L0 1181 aa21.38■■□□□ 1.01
HMGA2-211ENST00000545998 TMEM59LQ9UK28 342 aa21.38■■□□□ 1.01
HMGA2-211ENST00000545998 SH3BP1Q9Y3L3 701 aa21.38■■□□□ 1.01
HMGA2-211ENST00000545998 HBS1LQ9Y450 684 aaKnown RBP21.38■■□□□ 1.01
HMGA2-211ENST00000545998 WNT6Q9Y6F9 365 aa21.38■■□□□ 1.01
HMGA2-211ENST00000545998 MSI1O43347 362 aaKnown RBP21.37■■□□□ 1.01
HMGA2-211ENST00000545998 PFKPQ01813 784 aa21.37■■□□□ 1.01
HMGA2-211ENST00000545998 DCAF6Q58WW2 860 aa21.37■■□□□ 1.01
HMGA2-211ENST00000545998 TRIM68Q6AZZ1 485 aa21.37■■□□□ 1.01
HMGA2-211ENST00000545998 HTR3DQ70Z44 454 aa21.37■■□□□ 1.01
HMGA2-211ENST00000545998 PHLDB2Q86SQ0 1253 aa21.37■■□□□ 1.01
HMGA2-211ENST00000545998 VCPIP1Q96JH7 1222 aa21.37■■□□□ 1.01
HMGA2-211ENST00000545998 DUS2Q9NX74 493 aaKnown RBP21.37■■□□□ 1.01
HMGA2-211ENST00000545998 MYOFQ9NZM1 2061 aa21.37■■□□□ 1.01
HMGA2-211ENST00000545998 A0A087X0T9 212 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 SCAMP3O14828 347 aaKnown RBP21.36■■□□□ 1.01
HMGA2-211ENST00000545998 RTN2O75298 545 aa21.36■■□□□ 1.01
HMGA2-211ENST00000545998 FTLP02792 175 aaPredicted RBP21.36■■□□□ 1.01
HMGA2-211ENST00000545998 HMBSP08397 361 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms