RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 IGBP1P78318 339 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 XKR4Q5GH76 650 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 EFHC1Q5JVL4 640 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 CAPN12Q6ZSI9 719 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.92□□□□□ -0.34
PAAF1-215ENST00000544909 UBA3Q8TBC4 463 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 AGAP11Q8TF27 550 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 CPB2Q96IY4 423 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 ABHD16BQ9H3Z7 469 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.92□□□□□ -0.34
PAAF1-215ENST00000544909 NRCAMQ92823 1304 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 PLXNB2O15031 1838 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 SMIM35A0A1B0GVV1 85 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 SLC15A5A6NIM6 579 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 FAM159BA6NKW6 160 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 VGLL3A8MV65 326 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 COPEO14579 308 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 BANF1O75531 89 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 DDNO94850 711 aaPredicted RBP12.92□□□□□ -0.34
PAAF1-215ENST00000544909 VTNP04004 478 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 ADORA2AP29274 412 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 ZNF135P52742 658 aaPredicted RBP12.92□□□□□ -0.34
PAAF1-215ENST00000544909 GAD2Q05329 585 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 MMRN1Q13201 1228 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 EFTUD2Q15029 972 aaKnown RBP eCLIP12.92□□□□□ -0.34
PAAF1-215ENST00000544909 CTC1Q2NKJ3 1217 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 C15orf59Q2T9L4 293 aaPredicted RBP12.92□□□□□ -0.34
PAAF1-215ENST00000544909 HP1BP3Q5SSJ5 553 aaPredicted RBP12.92□□□□□ -0.34
PAAF1-215ENST00000544909 MARCH8Q5T0T0 291 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 STEAP4Q687X5 459 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 IQSEC1Q6DN90 963 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 CAND1Q86VP6 1230 aaKnown RBP12.92□□□□□ -0.34
PAAF1-215ENST00000544909 ENDOVQ8N8Q3 282 aaKnown RBP12.92□□□□□ -0.34
PAAF1-215ENST00000544909 MAB21L3Q8N8X9 362 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 SPOCK2Q92563 424 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 TTC17Q96AE7 1141 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 SLC7A6OSQ96CW6 309 aaPredicted RBP12.92□□□□□ -0.34
PAAF1-215ENST00000544909 TNIP3Q96KP6 325 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 OLFM3Q96PB7 478 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 EBNA1BP2Q99848 306 aaKnown RBP12.92□□□□□ -0.34
PAAF1-215ENST00000544909 ADAMTS10Q9H324 1103 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 STN1Q9H668 368 aaKnown RBP12.92□□□□□ -0.34
PAAF1-215ENST00000544909 KCNK4Q9NYG8 393 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 SIRPGQ9P1W8 387 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 SORCS3Q9UPU3 1222 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 PLLPQ9Y342 182 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 SNX9Q9Y5X1 595 aa12.92□□□□□ -0.34
PAAF1-215ENST00000544909 MBLAC1A4D2B0 266 aaPredicted RBP12.91□□□□□ -0.34
PAAF1-215ENST00000544909 OPHN1O60890 802 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 ALDH1A2O94788 518 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 STK10O94804 968 aaKnown RBP12.91□□□□□ -0.34
PAAF1-215ENST00000544909 MMP3P08254 477 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 KCNE1P15382 129 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 CALB2P22676 271 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 CYP2F1P24903 491 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 RBL1P28749 1068 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 HOXA11P31270 313 aaPredicted RBP12.91□□□□□ -0.34
PAAF1-215ENST00000544909 L1CAMP32004 1257 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 SERPINB4P48594 390 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 ORC1Q13415 861 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 FRG1Q14331 258 aaKnown RBP12.91□□□□□ -0.34
PAAF1-215ENST00000544909 FBXO47Q5MNV8 452 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 TLDC1Q6P9B6 456 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 KYAT3Q6YP21 454 aaKnown RBP12.91□□□□□ -0.34
PAAF1-215ENST00000544909 IGDCC3Q8IVU1 814 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 SKA1Q96BD8 255 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 SRPK1Q96SB4 655 aaKnown RBP12.91□□□□□ -0.34
PAAF1-215ENST00000544909 SLC9A7Q96T83 725 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 R3HDMLQ9H3Y0 253 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 FAM96AQ9H5X1 160 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 RNPEPL1Q9HAU8 725 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 GGT7Q9UJ14 662 aa12.91□□□□□ -0.34
PAAF1-215ENST00000544909 I3L4J1 428 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 PIRO00625 290 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 LUC7L3O95232 432 aaKnown RBP12.9□□□□□ -0.34
PAAF1-215ENST00000544909 APRTP07741 180 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 DLDP09622 509 aaKnown RBP12.9□□□□□ -0.34
PAAF1-215ENST00000544909 T-ENOLP0DO92 83 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 FGFR1P11362 822 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 ELF1P32519 619 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 CRHR1P34998 444 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 FAAP100Q0VG06 881 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 SH3PXD2AQ5TCZ1 1133 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 C9orf57Q5W0N0 161 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 HEATR6Q6AI08 1181 aaKnown RBP12.9□□□□□ -0.34
PAAF1-215ENST00000544909 NPNTQ6UXI9 565 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 ARHGAP24Q8N264 748 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 NLGN2Q8NFZ4 835 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 PIWIL1Q96J94 861 aaKnown RBP12.9□□□□□ -0.34
PAAF1-215ENST00000544909 AP4E1Q9UPM8 1137 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 PDCD11Q14690 1871 aaKnown RBP12.9□□□□□ -0.34
PAAF1-215ENST00000544909 A0A0A0MRY4 1105 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 LIN7AO14910 233 aaPredicted RBP12.9□□□□□ -0.34
PAAF1-215ENST00000544909 XPO1O14980 1071 aaKnown RBP12.9□□□□□ -0.34
PAAF1-215ENST00000544909 HAUS5O94927 633 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 ARL4AP40617 200 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 MATKP42679 507 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 PSMC4P43686 418 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 ARFIP2P53365 341 aa12.9□□□□□ -0.34
PAAF1-215ENST00000544909 TTLL12Q14166 644 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms