RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 FZD10Q9ULW2 581 aa13.27□□□□□ -0.29
PAAF1-214ENST00000544552 AP4E1Q9UPM8 1137 aa13.27□□□□□ -0.29
PAAF1-214ENST00000544552 CENPFP49454 3210 aa13.27□□□□□ -0.29
PAAF1-214ENST00000544552 YJEFN3A6XGL0 299 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 E7ENQ6 273 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 F8W810 466 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 SMAPO00193 183 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 PQBP1O60828 265 aaKnown RBP13.26□□□□□ -0.29
PAAF1-214ENST00000544552 TADA2AO75478 443 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 F9P00740 461 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 ALDH2P05091 517 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 PECAM1P16284 738 aaPredicted RBP13.26□□□□□ -0.29
PAAF1-214ENST00000544552 NR2C2P49116 596 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 BCAR1P56945 870 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 ZNF844Q08AG5 666 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 MRPL58Q14197 206 aaKnown RBP13.26□□□□□ -0.29
PAAF1-214ENST00000544552 MORF4L2Q15014 288 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 NFE2Q16621 373 aaPredicted RBP13.26□□□□□ -0.29
PAAF1-214ENST00000544552 P3H1Q32P28 736 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 CEP85LQ5SZL2 805 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 SYPL2Q5VXT5 272 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 BHLHA9Q7RTU4 235 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 GPRIN1Q7Z2K8 1008 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 NECAB2Q7Z6G3 386 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 SPATA2LQ8IUW3 424 aaPredicted RBP13.26□□□□□ -0.29
PAAF1-214ENST00000544552 GLIS1Q8NBF1 620 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 RSAD2Q8WXG1 361 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 EXOC4Q96A65 974 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 NTAN1Q96AB6 310 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 ABHD8Q96I13 439 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 FUBP3Q96I24 572 aaKnown RBP eCLIP13.26□□□□□ -0.29
PAAF1-214ENST00000544552 TMEM209Q96SK2 561 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 TMEM175Q9BSA9 504 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 TMEM109Q9BVC6 243 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 MRPL9Q9BYD2 267 aaKnown RBP13.26□□□□□ -0.29
PAAF1-214ENST00000544552 SEMA4AQ9H3S1 761 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 HIPK3Q9H422 1215 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 DHX35Q9H5Z1 703 aaKnown RBP13.26□□□□□ -0.29
PAAF1-214ENST00000544552 C11orf49Q9H6J7 331 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 TMBIM4Q9HC24 238 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 GPATCH2LQ9NWQ4 482 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 PSD3Q9NYI0 1048 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 CALCOCO1Q9P1Z2 691 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 DNAJB4Q9UDY4 337 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 LRFN2Q9ULH4 789 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 PTPRDP23468 1912 aa13.26□□□□□ -0.29
PAAF1-214ENST00000544552 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.25□□□□□ -0.29
PAAF1-214ENST00000544552 CFAP69A5D8W1 941 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 GOLGA6CA6NDK9 693 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 GOLGA6L10A6NI86 522 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 M0QYT0 321 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 CAPN9O14815 690 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 USP17L7P0C7H9 530 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 GOLGA6DP0CG33 693 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 CYP2F1P24903 491 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 ATXN1P54253 815 aaKnown RBP13.25□□□□□ -0.29
PAAF1-214ENST00000544552 DEUP1Q05D60 604 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 FAAP100Q0VG06 881 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 GPS1Q13098 491 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 XRCC4Q13426 336 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 EMC10Q5UCC4 262 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 DENND2CQ68D51 928 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 HFE2Q6ZVN8 426 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 NPAS4Q8IUM7 802 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 ZCCHC9Q8N567 271 aaKnown RBP13.25□□□□□ -0.29
PAAF1-214ENST00000544552 CCDC185Q8N715 623 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 TET1Q8NFU7 2136 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 ARL8AQ96BM9 186 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 PAWRQ96IZ0 340 aaKnown RBP13.25□□□□□ -0.29
PAAF1-214ENST00000544552 TMEM51Q9NW97 253 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 GOLGA6AQ9NYA3 693 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 ADAM28Q9UKQ2 775 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 SHOC2Q9UQ13 582 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 NAALADL1Q9UQQ1 740 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 NLRC5Q86WI3 1866 aa13.25□□□□□ -0.29
PAAF1-214ENST00000544552 COL4A4P53420 1690 aaPredicted RBP13.25□□□□□ -0.29
PAAF1-214ENST00000544552 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.24□□□□□ -0.29
PAAF1-214ENST00000544552 BCLAF3A2AJT9 711 aaKnown RBP13.24□□□□□ -0.29
PAAF1-214ENST00000544552 HMGB1P1B2RPK0 211 aaPredicted RBP13.24□□□□□ -0.29
PAAF1-214ENST00000544552 RIPK2O43353 540 aa13.24□□□□□ -0.29
PAAF1-214ENST00000544552 MYZAPP0CAP1 466 aa13.24□□□□□ -0.29
PAAF1-214ENST00000544552 ZSCAN5DPP0CG00 497 aa13.24□□□□□ -0.29
PAAF1-214ENST00000544552 EN2P19622 333 aaPredicted RBP13.24□□□□□ -0.29
PAAF1-214ENST00000544552 ARL4AP40617 200 aa13.24□□□□□ -0.29
PAAF1-214ENST00000544552 VPS41P49754 854 aa13.24□□□□□ -0.29
PAAF1-214ENST00000544552 ROR1Q01973 937 aa13.24□□□□□ -0.29
PAAF1-214ENST00000544552 SCAPQ12770 1279 aa13.24□□□□□ -0.29
PAAF1-214ENST00000544552 ELAVL2Q12926 359 aaKnown RBP13.24□□□□□ -0.29
PAAF1-214ENST00000544552 SLC29A2Q14542 456 aa13.24□□□□□ -0.29
PAAF1-214ENST00000544552 TTMPQ5BVD1 217 aa13.24□□□□□ -0.29
PAAF1-214ENST00000544552 PPP6R3Q5H9R7 873 aaPredicted RBP13.24□□□□□ -0.29
PAAF1-214ENST00000544552 RNASEH2BQ5TBB1 312 aaKnown RBP13.24□□□□□ -0.29
PAAF1-214ENST00000544552 VSTM1Q6UX27 236 aa13.24□□□□□ -0.29
PAAF1-214ENST00000544552 FAM131BQ86XD5 332 aa13.24□□□□□ -0.29
PAAF1-214ENST00000544552 FAM76AQ8TAV0 307 aa13.24□□□□□ -0.29
PAAF1-214ENST00000544552 DIS3LQ8TF46 1054 aaKnown RBP13.24□□□□□ -0.29
PAAF1-214ENST00000544552 RTP4Q96DX8 246 aa13.24□□□□□ -0.29
PAAF1-214ENST00000544552 ATP6V1G3Q96LB4 118 aa13.24□□□□□ -0.29
PAAF1-214ENST00000544552 CSPG4P5Q96PW8 444 aa13.24□□□□□ -0.29
PAAF1-214ENST00000544552 KCTD15Q96SI1 283 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms