RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 CES3Q6UWW8 571 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 NIPA1Q7RTP0 329 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 SPATA16Q9BXB7 569 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 TLR10Q9BXR5 811 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 UBE2OQ9C0C9 1292 aaKnown RBP13.19□□□□□ -0.3
CHD4-211ENST00000544484 ZNF556Q9HAH1 456 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 XPNPEP3Q9NQH7 507 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 RARAP10276 462 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 UBA1P22314 1058 aaKnown RBP13.19□□□□□ -0.3
CHD4-211ENST00000544484 AQP5P55064 265 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 GCNT1Q02742 428 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 NT5DC3Q86UY8 548 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 ABHD8Q96I13 439 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 GPAMQ9HCL2 828 aa13.19□□□□□ -0.3
CHD4-211ENST00000544484 VWDEQ8N2E2 1590 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 RASSF10A6NK89 507 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 UBTFL6P0CB48 400 aaPredicted RBP13.18□□□□□ -0.3
CHD4-211ENST00000544484 CCR1P32246 355 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 ELK3P41970 407 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 MMP14P50281 582 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 OAZ1P54368 228 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 YWHAZP63104 245 aaKnown RBP13.18□□□□□ -0.3
CHD4-211ENST00000544484 PPP3CAQ08209 521 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 MAP4K3Q8IVH8 894 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 DEFB106AQ8N104 65 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 VPS37AQ8NEZ2 397 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 VANGL2Q9ULK5 521 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 ERI2A8K979 691 aaKnown RBP13.18□□□□□ -0.3
CHD4-211ENST00000544484 H3BQF6 201 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 BLVRAP53004 296 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 ZPBP2Q6X784 338 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 SETD3Q86TU7 594 aaPredicted RBP13.18□□□□□ -0.3
CHD4-211ENST00000544484 ZNF513Q8N8E2 541 aaPredicted RBP13.18□□□□□ -0.3
CHD4-211ENST00000544484 DNAJC9Q8WXX5 260 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 VPS50Q96JG6 964 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 CLPBQ9H078 707 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 PDGFCQ9NRA1 345 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 NAALADL1Q9UQQ1 740 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 SPATA31D1Q6ZQQ2 1576 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 KCNA3P22001 575 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 TJAP1Q5JTD0 557 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 SLC44A2Q8IWA5 706 aaPredicted RBP13.18□□□□□ -0.3
CHD4-211ENST00000544484 HAS1Q92839 578 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 ASB7Q9H672 318 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 VTA1Q9NP79 307 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 SELENONQ9NZV5 590 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 CDV3Q9UKY7 258 aaKnown RBP13.18□□□□□ -0.3
CHD4-211ENST00000544484 E9PBE3 544 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 PIK3CDO00329 1044 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 KLHL41O60662 606 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 ITGB6P18564 788 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 EPHB3P54753 998 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 AARS2Q5JTZ9 985 aaKnown RBP13.18□□□□□ -0.3
CHD4-211ENST00000544484 HORMAD1Q86X24 394 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 CNPY4Q8N129 248 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 MIER2Q8N344 545 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 HES6Q96HZ4 224 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 MAGEB18Q96M61 343 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 NAT9Q9BTE0 207 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 ACOT9Q9Y305 439 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 ZBTB22O15209 634 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 TBC1D4O60343 1298 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 SSTR1P30872 391 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 RPL21P46778 160 aaKnown RBP13.18□□□□□ -0.3
CHD4-211ENST00000544484 PSEN2P49810 448 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 HIST2H2ACQ16777 129 aaPredicted RBP13.18□□□□□ -0.3
CHD4-211ENST00000544484 PRAMEF19Q5SWL8 479 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 HIST2H2AA3Q6FI13 130 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 C1orf186Q6ZWK4 172 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 JADE3Q92613 823 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 USP13Q92995 863 aaPredicted RBP13.18□□□□□ -0.3
CHD4-211ENST00000544484 ZNF333Q96JL9 665 aa13.18□□□□□ -0.3
CHD4-211ENST00000544484 E5RJQ4 531 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 PLA2G6O60733 806 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 LGALS2P05162 132 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 FAM153BP0C7A2 387 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 AKR1A1P14550 325 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 CDH2P19022 906 aaPredicted RBP13.17□□□□□ -0.3
CHD4-211ENST00000544484 KLC1Q07866 573 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 FAM153CQ494X1 144 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 MARC1Q5VT66 337 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 EFL1Q7Z2Z2 1120 aaKnown RBP13.17□□□□□ -0.3
CHD4-211ENST00000544484 UBXN6Q9BZV1 441 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 PCDH9Q9HC56 1237 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 FAM153AQ9UHL3 310 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 TMEM131LA2VDJ0 1609 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 MEIS2O14770 477 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 CCND1P24385 295 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 WASHC5Q12768 1159 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 ZNF268Q14587 947 aaPredicted RBP13.17□□□□□ -0.3
CHD4-211ENST00000544484 WDR59Q6PJI9 974 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 SUGP1Q8IWZ8 645 aaKnown RBP13.17□□□□□ -0.3
CHD4-211ENST00000544484 GAD1Q99259 594 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 PDGFDQ9GZP0 370 aaPredicted RBP13.17□□□□□ -0.3
CHD4-211ENST00000544484 CCDC134Q9H6E4 229 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 HES2Q9Y543 173 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 SNCAIPQ9Y6H5 919 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 IRF6O14896 467 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 XPO1O14980 1071 aaKnown RBP13.17□□□□□ -0.3
CHD4-211ENST00000544484 GLP2RO95838 553 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms