RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 PCDHB7Q9Y5E2 793 aa14.25□□□□□ -0.13
HCFC2-202ENST00000544223 GOLGA6CA6NDK9 693 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 DPYSL4O14531 572 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 GOLGA6DP0CG33 693 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 HPDP32754 393 aaPredicted RBP14.24□□□□□ -0.13
HCFC2-202ENST00000544223 GRIK1P39086 918 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 DAOAP59103 153 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 COPS2P61201 443 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 FAM189BP81408 668 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 FAM171A1Q5VUB5 890 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 ATAD1Q8NBU5 361 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 EPS8L3Q8TE67 593 aaKnown RBP14.24□□□□□ -0.13
HCFC2-202ENST00000544223 SLCO2A1Q92959 643 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 SUSD3Q96L08 255 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 CASD1Q96PB1 797 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 PKMYT1Q99640 499 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 GOLGA6AQ9NYA3 693 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 CWC15Q9P013 229 aaKnown RBP14.24□□□□□ -0.13
HCFC2-202ENST00000544223 NLRC5Q86WI3 1866 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 TBKBP1A7MCY6 615 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 EOMESO95936 686 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 ITGB8P26012 769 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 PCSK1P29120 753 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 DRG2P55039 364 aaKnown RBP14.24□□□□□ -0.13
HCFC2-202ENST00000544223 TAZQ16635 292 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 ALS2CLQ60I27 953 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 FAM171BQ6P995 826 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 DARS2Q6PI48 645 aaKnown RBP14.24□□□□□ -0.13
HCFC2-202ENST00000544223 GRK7Q8WTQ7 553 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 CENPIQ92674 756 aaPredicted RBP14.24□□□□□ -0.13
HCFC2-202ENST00000544223 LRRC45Q96CN5 670 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 SMARCD1Q96GM5 515 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 ACBD6Q9BR61 282 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 CDC42EP4Q9H3Q1 356 aaKnown RBP14.24□□□□□ -0.13
HCFC2-202ENST00000544223 MED4Q9NPJ6 270 aa14.24□□□□□ -0.13
HCFC2-202ENST00000544223 H7C0C1 242 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 ENDOD1O94919 500 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 ZBED1O96006 694 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 RPLP2P05387 115 aaKnown RBP14.23□□□□□ -0.13
HCFC2-202ENST00000544223 RPL17P18621 184 aaKnown RBP14.23□□□□□ -0.13
HCFC2-202ENST00000544223 ACADSBP45954 432 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 ATP5OP48047 213 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 LMAN1P49257 510 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 SLC25A52Q3SY17 297 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 RHBDF2Q6PJF5 856 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 P3H4Q92791 437 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 MRRFQ96E11 262 aaKnown RBP14.23□□□□□ -0.13
HCFC2-202ENST00000544223 ERICH4A6NGS2 130 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 MSI1O43347 362 aaKnown RBP14.23□□□□□ -0.13
HCFC2-202ENST00000544223 CSPG5O95196 566 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 RPL22P35268 128 aaKnown RBP14.23□□□□□ -0.13
HCFC2-202ENST00000544223 PTPN9P43378 593 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 SLC11A1P49279 550 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 IFFO1Q0D2I5 559 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 ACAP1Q15027 740 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 ARHGEF6Q15052 776 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 EFHC1Q5JVL4 640 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 SLC39A5Q6ZMH5 540 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 ZDHHC17Q8IUH5 632 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 URGCPQ8TCY9 931 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 RSAD2Q8WXG1 361 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 POPDC2Q9HBU9 364 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 UBN1Q9NPG3 1134 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 DDIT4Q9NX09 232 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 SAGE1Q9NXZ1 904 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 CTNNAL1Q9UBT7 734 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 OGDHLQ9ULD0 1010 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 LRFN2Q9ULH4 789 aa14.23□□□□□ -0.13
HCFC2-202ENST00000544223 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.23□□□□□ -0.13
HCFC2-202ENST00000544223 APOC4-APOC2K7ER74 178 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 C2CD2LO14523 706 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 CAND2O75155 1236 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 APOC2P02655 101 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 RBL1P28749 1068 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 PTPN7P35236 360 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 DEUP1Q05D60 604 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 BFSP2Q13515 415 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 LONRF1Q17RB8 773 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 KRT71Q3SY84 523 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 CCDC38Q502W7 563 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 BOLA3Q53S33 107 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 VARS2Q5ST30 1063 aaKnown RBP14.22□□□□□ -0.13
HCFC2-202ENST00000544223 PRSS55Q6UWB4 352 aaPredicted RBP14.22□□□□□ -0.13
HCFC2-202ENST00000544223 ANKMY2Q8IV38 441 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 CCDC89Q8N998 374 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 CRISPLD1Q9H336 500 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 TMEM161AQ9NX61 479 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 MTRF1LQ9UGC7 380 aaKnown RBP14.22□□□□□ -0.13
HCFC2-202ENST00000544223 SFMBT1Q9UHJ3 866 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 SQORQ9Y6N5 450 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 PTPRDP23468 1912 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 AVILO75366 819 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 CYP11A1P05108 521 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 SKIP12755 728 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 ITIH2P19823 946 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 USP46P62068 366 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 SPATA2LQ8IUW3 424 aaPredicted RBP14.22□□□□□ -0.13
HCFC2-202ENST00000544223 KCTD13Q8WZ19 329 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 VWCEQ96DN2 955 aa14.22□□□□□ -0.13
HCFC2-202ENST00000544223 CSPG4P5Q96PW8 444 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms