RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-219	ENST00000543660	SPATA31C1	P0DKV0	1188 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	HLA-E	P13747	358 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	CPA1	P15085	419 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	GABRG2	P18507	467 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	TYMP	P19971	482 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	PROZ	P22891	400 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	LRPAP1	P30533	357 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	HSPA4	P34932	840 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	EIF4A3	P38919	411 aa	Known RBP	5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	SLC6A11	P48066	632 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	IFNAR2	P48551	515 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	CDKN1C	P49918	316 aa	Predicted RBP	5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	EFNA5	P52803	228 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	FAM160A1	Q05DH4	1040 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	DMP1	Q13316	513 aa	Predicted RBP	5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	MAPRE1	Q15691	268 aa	Known RBP	5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	SLC10A6	Q3KNW5	377 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	GRAMD1B	Q3KR37	738 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	MGAT5B	Q3V5L5	792 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	ZNF568	Q3ZCX4	644 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	HSF5	Q4G112	596 aa	Predicted RBP	5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	SLC39A12	Q504Y0	691 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	OVOS1	Q6IE37	1185 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	GALNT17	Q6IS24	598 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	SLC36A4	Q6YBV0	504 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	LRRC69	Q6ZNQ3	347 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	USP37	Q86T82	979 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	LRRTM3	Q86VH5	581 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	KRTAP1-3	Q8IUG1	177 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	SLFN12	Q8IYM2	578 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	LILRB2	Q8N423	598 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	OR10T2	Q8NGX3	314 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	DEPTOR	Q8TB45	409 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	LRRC15	Q8TF66	581 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	SETD7	Q8WTS6	366 aa	Known RBP	5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	BRF1	Q92994	677 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	WBP1	Q96G27	269 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	HSPA12B	Q96MM6	686 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	CCDC43	Q96MW1	224 aa	Known RBP	5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	AIFM3	Q96NN9	605 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	ACAP3	Q96P50	834 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	PNMA5	Q96PV4	448 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	NACC1	Q96RE7	527 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	SLC22A12	Q96S37	553 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	CDC6	Q99741	560 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	ACO2	Q99798	780 aa	Known RBP	5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	ESYT1	Q9BSJ8	1104 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	C2orf49	Q9BVC5	232 aa	Predicted RBP	5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	ZDHHC5	Q9C0B5	715 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	FAM124B	Q9H5Z6	455 aa	Predicted RBP	5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	NCOA5	Q9HCD5	579 aa	Known RBP	5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	POLD4	Q9HCU8	107 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	ZDHHC4	Q9NPG8	344 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	ZNF638	Q14966	1978 aa	Known RBP	5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	MUC22	E2RYF6	1773 aa	Predicted RBP	5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	BSN	Q9UPA5	3926 aa		5.21	□□□□□ -1.58
NPIPB4-219	ENST00000543660	USP9Y	O00507	2555 aa	Predicted RBP	5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	TLN1	Q9Y490	2541 aa	Known RBP	5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	CIT	O14578	2027 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660		K7ERI5	159 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	RRP8	O43159	456 aa	Known RBP	5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	CILP	O75339	1184 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	BAG4	O95429	457 aa	Known RBP	5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	NFATC1	O95644	943 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	ASMTL	O95671	621 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	NTRK1	P04629	796 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	MCF2	P10911	925 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	HAPLN1	P10915	354 aa	Predicted RBP	5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	CYP11B2	P19099	503 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	MAOB	P27338	520 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	COL8A1	P27658	744 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	CCT2	P78371	535 aa	Known RBP	5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	ZXDB	P98169	803 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	NFKB2	Q00653	900 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	POU5F1	Q01860	360 aa	Known RBP	5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	BNC1	Q01954	994 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	TLE3	Q04726	772 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	MYO1E	Q12965	1108 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	ZBTB6	Q15916	424 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	TAF12	Q16514	161 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	FXN	Q16595	210 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	EARS2	Q5JPH6	523 aa	Known RBP	5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	EOGT	Q5NDL2	527 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	ARMCX5	Q6P1M9	558 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	DSTYK	Q6XUX3	929 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660		Q6ZUG5	572 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	CATSPER3	Q86XQ3	398 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	ADGRG2	Q8IZP9	1017 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	FBXL16	Q8N461	479 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	PDILT	Q8N807	584 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	TEX19	Q8NA77	164 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	STKLD1	Q8NE28	680 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	ZSWIM2	Q8NEG5	633 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	OR6P1	Q8NGX9	317 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	RHBDD1	Q8TEB9	315 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	SH3RF2	Q8TEC5	729 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	SNX29	Q8TEQ0	813 aa		5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	MRPS31	Q92665	395 aa	Known RBP	5.2	□□□□□ -1.58
NPIPB4-219	ENST00000543660	NT5C1A	Q9BXI3	368 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms