RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 KIF20AO95235 890 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 PRKCBP05771 671 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 STMN1P16949 149 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 SLC6A2P23975 617 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 ACVR2AP27037 513 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 EEF1DP29692 281 aaKnown RBP4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 AKT1P31749 480 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 ACTN2P35609 894 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 NNMTP40261 264 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 TNNT3P45378 269 aaPredicted RBP4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 SLC11A2P49281 568 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 TUBP50607 506 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 RBM5P52756 815 aaKnown RBP eCLIP4.3□□□□□ -1.727e-7■■■■■ 30.7
GTF2H3-213ENST00000543415 HTRA4P83105 476 aaPredicted RBP4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 GOLGA8FQ08AF8 430 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 GOLGA8DPQ0D2H9 430 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 NEXNQ0ZGT2 675 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 CUL4BQ13620 913 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 SEC23BQ15437 767 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 SMAD1Q15797 465 aaKnown RBP4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 NAA16Q6N069 864 aaPredicted RBP4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 MFSD5Q6N075 450 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 CASC1Q6TDU7 716 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 MED25Q71SY5 747 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 GALNTL5Q7Z4T8 443 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 PRPF39Q86UA1 669 aaKnown RBP4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 SGMS1Q86VZ5 419 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 MICU3Q86XE3 530 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 ERC1Q8IUD2 1116 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 CPOQ8IVL8 374 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 ELOA2Q8IYF1 753 aaPredicted RBP4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 CCDC105Q8IYK2 499 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 CEP57L1Q8IYX8 460 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 SRBD1Q8N5C6 995 aaKnown RBP4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 TMCO5AQ8N6Q1 288 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 GLIS1Q8NBF1 620 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 OR56A3Q8NH54 315 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 ETNPPLQ8TBG4 499 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 ZNF483Q8TF39 744 aaPredicted RBP4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 ZNF384Q8TF68 577 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 NEU4Q8WWR8 484 aaPredicted RBP4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 RSPH1Q8WYR4 309 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 RAPGEF4Q8WZA2 1011 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 SCAMP4Q969E2 229 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 NSUN4Q96CB9 384 aaKnown RBP4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 RNF125Q96EQ8 232 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 CCDC43Q96MW1 224 aaKnown RBP4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 ASB2Q96Q27 587 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 MPHOSPH9Q99550 1183 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 MS4A7Q9GZW8 240 aaPredicted RBP4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 PCDHAC1Q9H158 963 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 SIL1Q9H173 461 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 IKZF4Q9H2S9 585 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 PABPC3Q9H361 631 aaKnown RBP4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 GHITMQ9H3K2 345 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 SMARCAD1Q9H4L7 1026 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 GPR35Q9HC97 309 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 TAS2R10Q9NYW0 307 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 XPR1Q9UBH6 696 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 MID2Q9UJV3 735 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 CDYLQ9Y232 598 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 HS3ST4Q9Y661 456 aa4.3□□□□□ -1.72
GTF2H3-213ENST00000543415 LOC102723971A0A1B0GUV8 181 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 hCG_1807616A0A1W2PRN6 198 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 SAC3D1A6NKF1 404 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 H0Y3Z8 333 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 RAB27BO00194 218 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 SPTLC2O15270 562 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 CCP110O43303 1012 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 MFAP3LO75121 409 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 DNAJB5O75953 348 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 KRT38O76015 456 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 IPO13O94829 963 aaKnown RBP4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 HSPA4LO95757 839 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 CHEK2O96017 543 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 VIPP01282 170 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 PIM1P11309 404 aaPredicted RBP4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 CYP2C9P11712 490 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 SCG2P13521 617 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 HK1P19367 917 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 SAT1P21673 171 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 MGAT1P26572 445 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 ATP5DP30049 168 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 CPT1AP50416 773 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 MC1RQ01726 317 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 EIF2B5Q13144 721 aaKnown RBP4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 ELAVL1Q15717 326 aaKnown RBP4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 ARHGAP15Q53QZ3 475 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 RINT1Q6NUQ1 792 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 CYP20A1Q6UW02 462 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 Q6ZRM9 215 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 DOK3Q7L591 496 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 HERC6Q8IVU3 1022 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 UNC45BQ8IWX7 931 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 LMNTD2Q8IXW0 634 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 DIS3L2Q8IYB7 885 aaKnown RBP4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 ADSSL1Q8N142 457 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 VGLL2Q8N8G2 317 aa4.29□□□□□ -1.72
GTF2H3-213ENST00000543415 PDPRQ8NCN5 879 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms