RNA–Protein interactions for RNA: ENST00000542264.1

ARAP1-215, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, human

TSL 3

Gene ARAP1, Length 271 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARAP1-215	ENST00000542264	UAP1L1	Q3KQV9	507 aa		11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	C10orf120	Q5SQS8	335 aa		11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	C1orf220	Q5T0J3	134 aa		11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	SPOPL	Q6IQ16	392 aa		11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	SLC23A3	Q6PIS1	610 aa		11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	CLEC20A	Q6ZU45	233 aa		11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	ARHGAP18	Q8N392	663 aa		11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	ELMO3	Q96BJ8	720 aa		11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	SPATA32	Q96LK8	384 aa		11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	HEXIM2	Q96MH2	286 aa	Known RBP	11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	DUSP16	Q9BY84	665 aa		11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	UBXN6	Q9BZV1	441 aa		11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	DCLK3	Q9C098	648 aa		11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	CLIC5	Q9NZA1	410 aa		11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	MBD1	Q9UIS9	605 aa	Predicted RBP	11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	SLC6A14	Q9UN76	642 aa		11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	HPSE	Q9Y251	543 aa		11.21	□□□□□ -0.61
ARAP1-215	ENST00000542264	DENND4C	Q5VZ89	1909 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264		A0A1W2PQF6	199 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	UPK3BL1	B0FP48	263 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	HHLA1	C9JL84	531 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	UPK3BL2	E5RIL1	263 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	NEDD8-MDP1	E9PL57	170 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	NPC1	O15118	1278 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	PROS1	P07225	676 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	GABRG2	P18507	467 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	GCLM	P48507	274 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	DGKG	P49619	791 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	PGF	P49763	221 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	MCCD1	P59942	119 aa	Predicted RBP	11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	RPL6	Q02878	288 aa	Known RBP	11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	ZNF33A	Q06730	810 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	SYCP2L	Q5T4T6	812 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	TPGS1	Q6ZTW0	290 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	CCDC186	Q7Z3E2	898 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	FAM186B	Q8IYM0	893 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	GUF1	Q8N442	669 aa	Known RBP	11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	HDDC3	Q8N4P3	179 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	FRMD1	Q8N878	549 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	TAS1R2	Q8TE23	839 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	IPO4	Q8TEX9	1081 aa	Known RBP	11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	WBP2	Q969T9	261 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	NIF3L1	Q9GZT8	377 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	TMEM8A	Q9HCN3	771 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	ZDHHC4	Q9NPG8	344 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	TMEM74B	Q9NUR3	256 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	HMGXB4	Q9UGU5	601 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	NAGPA	Q9UK23	515 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	ATP6V1D	Q9Y5K8	247 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	KIF26A	Q9ULI4	1882 aa	Predicted RBP	11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	FAM208B	Q5VWN6	2430 aa		11.2	□□□□□ -0.62
ARAP1-215	ENST00000542264	FAM237A	A0A1B0GTK4	181 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264		A0A1W2PQH9	124 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	GIPC1	O14908	333 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	TRIM24	O15164	1050 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	CYP26A1	O43174	497 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	TIMM44	O43615	452 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	NDUFS2	O75306	463 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	CILP	O75339	1184 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	CFI	P05156	583 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	SYP	P08247	313 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	SERPINF2	P08697	491 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	CISD3	P0C7P0	127 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	ENG	P17813	658 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	ITPKA	P23677	461 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	MAPK8	P45983	427 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	PPP3CA	Q08209	521 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	ZNF252P-AS1	Q0IIN9	211 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	PKP1	Q13835	747 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	KRT39	Q6A163	491 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	ARMCX6	Q7L4S7	300 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	GPRIN1	Q7Z2K8	1008 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	FOXJ1	Q92949	421 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	TWNK	Q96RR1	684 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	GABRG3	Q99928	467 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	NMUR1	Q9HB89	426 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	APOBEC3G	Q9HC16	384 aa	Known RBP	11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	OSER1	Q9NX31	292 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	CALCOCO1	Q9P1Z2	691 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	FBXO10	Q9UK96	956 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	STRIP2	Q9ULQ0	834 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	SLC27A6	Q9Y2P4	619 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	USP3	Q9Y6I4	520 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264	FRY	Q5TBA9	3013 aa		11.19	□□□□□ -0.62
ARAP1-215	ENST00000542264		A0A1W2PQ27	194 aa		11.18	□□□□□ -0.62
ARAP1-215	ENST00000542264		A0A1W2PQ64	194 aa		11.18	□□□□□ -0.62
ARAP1-215	ENST00000542264		A0A1W2PQD8	194 aa		11.18	□□□□□ -0.62
ARAP1-215	ENST00000542264	PRRT4	C9JH25	899 aa		11.18	□□□□□ -0.62
ARAP1-215	ENST00000542264	CETN3	O15182	167 aa		11.18	□□□□□ -0.62
ARAP1-215	ENST00000542264	STC2	O76061	302 aa		11.18	□□□□□ -0.62
ARAP1-215	ENST00000542264	CYBB	P04839	570 aa		11.18	□□□□□ -0.62
ARAP1-215	ENST00000542264	GNS	P15586	552 aa		11.18	□□□□□ -0.62
ARAP1-215	ENST00000542264	CD58	P19256	250 aa		11.18	□□□□□ -0.62
ARAP1-215	ENST00000542264	WAS	P42768	502 aa		11.18	□□□□□ -0.62
ARAP1-215	ENST00000542264	NDUFA8	P51970	172 aa		11.18	□□□□□ -0.62
ARAP1-215	ENST00000542264	DPYD	Q12882	1025 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms