RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 ZNF398Q8TD17 642 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 CHAC2Q8WUX2 184 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 BCL7CQ8WUZ0 217 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 UCMAQ8WVF2 138 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 ANKS1AQ92625 1134 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF669Q96BR6 464 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 TBC1D20Q96BZ9 403 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 FBXL18Q96ME1 805 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 COG8Q96MW5 612 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF641Q96N77 438 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 OPALINQ96PE5 141 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 VPS35Q96QK1 796 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 PLEKHF1Q96S99 279 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 SLC9A7Q96T83 725 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 FERMT1Q9BQL6 677 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 DESI2Q9BSY9 194 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 DDX23Q9BUQ8 820 aaKnown RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 METTL22Q9BUU2 404 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 PHF20Q9BVI0 1012 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 SNX25Q9H3E2 840 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 DENND2DQ9H6A0 471 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 AKTIPQ9H8T0 292 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 PLEKHA5Q9HAU0 1116 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 USP29Q9HBJ7 922 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 SSU72Q9NP77 194 aaKnown RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 VPS45Q9NRW7 570 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 IGSF9Q9P2J2 1179 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 FBXO2Q9UK22 296 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 USP21Q9UK80 565 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 SNX12Q9UMY4 172 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 STK38LQ9Y2H1 464 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 UTP11Q9Y3A2 253 aaKnown RBP4.51□□□□□ -1.69
SNHG1-219ENST00000542112 CSNK1G3Q9Y6M4 447 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 NRKQ7Z2Y5 1582 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 USP54Q70EL1 1684 aa4.51□□□□□ -1.69
SNHG1-219ENST00000542112 CD163L1Q9NR16 1453 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 MAP3K19Q56UN5 1328 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 PNPLA7Q6ZV29 1317 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 PCDH11XQ9BZA7 1347 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 NALCNQ8IZF0 1738 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 FMN2Q9NZ56 1722 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 PTPRUQ92729 1446 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 C17orf113A0A1B0GUU1 675 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 FAM221BA6H8Z2 402 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CCDC85CA6NKD9 419 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 TRPC5OSA6NMA1 111 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 FAM25AB3EWG3 89 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 FAM25CB3EWG5 89 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 FAM25GB3EWG6 89 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 H0YGN5 161 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 SLC9A3R1O14745 358 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ZW10O43264 779 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 KLHL41O60662 606 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CCDC22O60826 627 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 DKC1O60832 514 aaKnown RBP eCLIP4.5□□□□□ -1.695e-7■■□□□ 13.2
SNHG1-219ENST00000542112 OPHN1O60890 802 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 RNGTTO60942 597 aaKnown RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ATP2C2O75185 946 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 DDHD2O94830 711 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 SNAPINO95295 136 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 TNFAIP8O95379 198 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 PLEKHA8P1O95397 391 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 GAS8O95995 478 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CLPTM1O96005 669 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 APBA3O96018 575 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CST3P01034 146 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 IFNA14P01570 189 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CD4P01730 458 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 AFPP02771 609 aaKnown RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CYP1A1P04798 512 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 GSTM1P09488 218 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 NUDT17P0C025 328 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 DRD2P14416 443 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 GLULP15104 373 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 HSPA6P17066 643 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CMA1P23946 247 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ACAT1P24752 427 aaKnown RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 PTX3P26022 381 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 GSTM2P28161 218 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 LTKP29376 864 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 LRPAP1P30533 357 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CYLC1P35663 651 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ME1P48163 572 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CDK9P50750 372 aaKnown RBP4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CHN2P52757 468 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 TNNC1P63316 161 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 TMPRSS15P98073 1019 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 LRRC63Q05C16 580 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 BAMBIQ13145 260 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 PPP2R5CQ13362 524 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ALX1Q15699 326 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 NPTX1Q15818 432 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 STK11Q15831 433 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CLUL1Q15846 466 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 DGKDQ16760 1214 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 EDRF1Q3B7T1 1238 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 DPCR1Q3MIW9 517 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 FUT11Q495W5 492 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 CFAP221Q4G0U5 840 aa4.5□□□□□ -1.69
SNHG1-219ENST00000542112 ERAP2Q6P179 960 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms