RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 SCN4BQ8IWT1 228 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 GPR65Q8IYL9 337 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 ATAD1Q8NBU5 361 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 RAPGEF5Q92565 580 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 RNF25Q96BH1 459 aaPredicted RBP14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 KRT12Q99456 494 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 LRRC1Q9BTT6 524 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 EPC1Q9H2F5 836 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 KLHL11Q9NVR0 708 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 EFR3BQ9Y2G0 817 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 NR2E1Q9Y466 385 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 PCDHB12Q9Y5F1 795 aa14.86□□□□□ -0.03
CYB561A3-216ENST00000540755 C3orf70A6NLC5 250 aaPredicted RBP14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 CAPN9O14815 690 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 PHF2O75151 1096 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 VNN2O95498 520 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 LINC00271P0C7V0 271 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 HAPLN1P10915 354 aaPredicted RBP14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 TFE3P19532 575 aaPredicted RBP14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 KDELR1P24390 212 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 CHRNA3P32297 505 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 CDKN2BP42772 138 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 ARPP19P56211 112 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 ROR1Q01973 937 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 TAZQ16635 292 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 RAB6CQ53S08 254 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 TFDP3Q5H9I0 405 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 KCNT1Q5JUK3 1230 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 OTUD1Q5VV17 481 aaPredicted RBP14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 ADAT2Q7Z6V5 191 aaKnown RBP14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 VSIG1Q86XK7 387 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 KLHL7Q8IXQ5 586 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 ZDHHC14Q8IZN3 488 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 NUP93Q8N1F7 819 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 PRELID2Q8N945 189 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 C12orf50Q8NA57 414 aaPredicted RBP14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 SCAMP5Q8TAC9 235 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 CLP1Q92989 425 aaKnown RBP14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 PGAP3Q96FM1 320 aaPredicted RBP14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 SPATA17Q96L03 361 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 CEP295NLQ96MC4 621 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 RUNDC3BQ96NL0 473 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 TGS1Q96RS0 853 aaKnown RBP14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 PARD6BQ9BYG5 372 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 ADAM33Q9BZ11 813 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 RAB6CQ9H0N0 254 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 DDX47Q9H0S4 455 aaKnown RBP14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 FBXO44Q9H4M3 255 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 COMMD8Q9NX08 183 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 HSFX1Q9UBD0 423 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 RAB21Q9UL25 225 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 NAALADL1Q9UQQ1 740 aa14.85□□□□□ -0.03
CYB561A3-216ENST00000540755 hCG_1818297A0A087WSY0 165 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 TCRBV7S2A1N4TA0A589 114 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 WDR27A2RRH5 827 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 PI4K2BG5E9Z4 385 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 URODP06132 367 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 RDXP35241 583 aaKnown RBP14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 ARSEP51690 589 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 PDK2Q15119 407 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 SYPL2Q5VXT5 272 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 WDR93Q6P2C0 686 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 SCYL2Q6P3W7 929 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 ANKS1BQ7Z6G8 1248 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 CCDC26Q8TAB7 109 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 ACSF2Q96CM8 615 aaPredicted RBP14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 CLSTN3Q9BQT9 956 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 HERPUD2Q9BSE4 406 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 C17orf80Q9BSJ5 609 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 LRRC19Q9H756 370 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 PLXNA4Q9HCM2 1894 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 HOMER3Q9NSC5 361 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 IL37Q9NZH6 218 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 SCML2Q9UQR0 700 aa14.84□□□□□ -0.03
CYB561A3-216ENST00000540755 FAM92AA1XBS5 289 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 ADAM12O43184 909 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 RAD51CO43502 376 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 ATP8B1O43520 1251 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 TJP3O95049 919 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 RTN3O95197 1032 aaPredicted RBP14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 NCAM1P13591 858 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 H2AFXP16104 143 aaPredicted RBP14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 OR1D2P34982 312 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 FNTAP49354 379 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 GPR15P49685 360 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 RPL10AP62906 217 aaKnown RBP14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 DDR2Q16832 855 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 MGAT5BQ3V5L5 792 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 ERMARDQ5T6L9 678 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 BSPRYQ5W0U4 402 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 MAATS1Q7Z4T9 603 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 PSTKQ8IV42 348 aaKnown RBP14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 MAP7D3Q8IWC1 876 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 TTC9BQ8N6N2 239 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 KCTD6Q8NC69 237 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 FAM71BQ8TC56 605 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 HSPH1Q92598 858 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 PNKPQ96T60 521 aa14.83□□□□□ -0.03
CYB561A3-216ENST00000540755 SNRNP25Q9BV90 132 aaKnown RBP14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms