RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 SYNJ2O15056 1496 aa9□□□□□ -0.97
YBX3-208ENST00000540447 CES2O00748 559 aa9□□□□□ -0.97
YBX3-208ENST00000540447 POLBP06746 335 aa9□□□□□ -0.97
YBX3-208ENST00000540447 GMFBP60983 142 aa9□□□□□ -0.97
YBX3-208ENST00000540447 BST2Q10589 180 aaKnown RBP9□□□□□ -0.97
YBX3-208ENST00000540447 DPYSQ14117 519 aa9□□□□□ -0.97
YBX3-208ENST00000540447 HERC3Q15034 1050 aa9□□□□□ -0.97
YBX3-208ENST00000540447 C6orf52Q5T4I8 152 aa9□□□□□ -0.97
YBX3-208ENST00000540447 FBXO11Q86XK2 927 aa9□□□□□ -0.97
YBX3-208ENST00000540447 C7orf31Q8N865 590 aa9□□□□□ -0.97
YBX3-208ENST00000540447 XXYLT1Q8NBI6 393 aa9□□□□□ -0.97
YBX3-208ENST00000540447 SLC30A5Q8TAD4 765 aa9□□□□□ -0.97
YBX3-208ENST00000540447 NSUN6Q8TEA1 469 aaKnown RBP9□□□□□ -0.97
YBX3-208ENST00000540447 BTBD9Q96Q07 612 aa9□□□□□ -0.97
YBX3-208ENST00000540447 UQCC2Q9BRT2 126 aa9□□□□□ -0.97
YBX3-208ENST00000540447 PIF1Q9H611 641 aa9□□□□□ -0.97
YBX3-208ENST00000540447 FARSBQ9NSD9 589 aaKnown RBP9□□□□□ -0.97
YBX3-208ENST00000540447 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9□□□□□ -0.97
YBX3-208ENST00000540447 GNEQ9Y223 722 aaKnown RBP9□□□□□ -0.97
YBX3-208ENST00000540447 PP2D1A8MPX8 630 aa9□□□□□ -0.97
YBX3-208ENST00000540447 UGT1A9O60656 530 aa9□□□□□ -0.97
YBX3-208ENST00000540447 MYCLP1P12525 358 aaPredicted RBP9□□□□□ -0.97
YBX3-208ENST00000540447 UGT1A6P19224 532 aa9□□□□□ -0.97
YBX3-208ENST00000540447 UGT1A1P22309 533 aa9□□□□□ -0.97
YBX3-208ENST00000540447 UGT1A4P22310 534 aa9□□□□□ -0.97
YBX3-208ENST00000540447 RRM2P31350 389 aa9□□□□□ -0.97
YBX3-208ENST00000540447 UGT1A3P35503 534 aa9□□□□□ -0.97
YBX3-208ENST00000540447 UGT1A5P35504 534 aa9□□□□□ -0.97
YBX3-208ENST00000540447 HIRAP54198 1017 aaPredicted RBP9□□□□□ -0.97
YBX3-208ENST00000540447 EIF2B5Q13144 721 aaKnown RBP9□□□□□ -0.97
YBX3-208ENST00000540447 FAM47CQ5HY64 1035 aa9□□□□□ -0.97
YBX3-208ENST00000540447 TPTE2Q6XPS3 522 aa9□□□□□ -0.97
YBX3-208ENST00000540447 KRT77Q7Z794 578 aa9□□□□□ -0.97
YBX3-208ENST00000540447 SLC26A11Q86WA9 606 aa9□□□□□ -0.97
YBX3-208ENST00000540447 APBB2Q92870 758 aa9□□□□□ -0.97
YBX3-208ENST00000540447 COPS4Q9BT78 406 aa9□□□□□ -0.97
YBX3-208ENST00000540447 UGT1A7Q9HAW7 530 aa9□□□□□ -0.97
YBX3-208ENST00000540447 UGT1A10Q9HAW8 530 aa9□□□□□ -0.97
YBX3-208ENST00000540447 UGT1A8Q9HAW9 530 aa9□□□□□ -0.97
YBX3-208ENST00000540447 SLC35C2Q9NQQ7 365 aa9□□□□□ -0.97
YBX3-208ENST00000540447 NOD1Q9Y239 953 aa9□□□□□ -0.97
YBX3-208ENST00000540447 ADGRA2Q96PE1 1338 aa9□□□□□ -0.97
YBX3-208ENST00000540447 FAM240BA0A1B0GVZ2 78 aa9□□□□□ -0.97
YBX3-208ENST00000540447 METTL21EPA6NDL7 271 aa9□□□□□ -0.97
YBX3-208ENST00000540447 hCG_1984214I3L0E3 225 aa9□□□□□ -0.97
YBX3-208ENST00000540447 UBDO15205 165 aa9□□□□□ -0.97
YBX3-208ENST00000540447 ZC3H11AO75152 810 aaKnown RBP eCLIP9□□□□□ -0.973e-8■■□□□ 13.7
YBX3-208ENST00000540447 RPA3P35244 121 aaPredicted RBP9□□□□□ -0.97
YBX3-208ENST00000540447 PGDP52209 483 aa9□□□□□ -0.97
YBX3-208ENST00000540447 BTN3A2P78410 334 aa9□□□□□ -0.97
YBX3-208ENST00000540447 ZIK1Q3SY52 487 aaPredicted RBP9□□□□□ -0.97
YBX3-208ENST00000540447 CYB5R4Q7L1T6 521 aa9□□□□□ -0.97
YBX3-208ENST00000540447 HIPK1Q86Z02 1210 aa9□□□□□ -0.97
YBX3-208ENST00000540447 GALNT12Q8IXK2 581 aa9□□□□□ -0.97
YBX3-208ENST00000540447 PARP8Q8N3A8 854 aa9□□□□□ -0.97
YBX3-208ENST00000540447 ZNF713Q8N859 430 aaPredicted RBP9□□□□□ -0.97
YBX3-208ENST00000540447 SEC31BQ9NQW1 1179 aa9□□□□□ -0.97
YBX3-208ENST00000540447 A0A087X0T9 212 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 PLEKHA8P1O95397 391 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 ZNF682O95780 498 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 SERPINA1P01009 418 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 SERPINE1P05121 402 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 ITGA4P13612 1032 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 ADRA1DP25100 572 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 RPL21P46778 160 aaKnown RBP8.99□□□□□ -0.97
YBX3-208ENST00000540447 CSNK2BP67870 215 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 TBX2Q13207 712 aaPredicted RBP8.99□□□□□ -0.97
YBX3-208ENST00000540447 MYBPC3Q14896 1274 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 DGKDQ16760 1214 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 RWDD4Q6NW29 188 aaKnown RBP8.99□□□□□ -0.97
YBX3-208ENST00000540447 ZNF605Q86T29 641 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 IZUMO1Q8IYV9 350 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 GSTCDQ8NEC7 633 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 ATG4AQ8WYN0 398 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 EBF3Q9H4W6 596 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 COPRSQ9NQ92 184 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 APEX2Q9UBZ4 518 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 ZNF112Q9UJU3 913 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 SLC39A10Q9ULF5 831 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 PSMD13Q9UNM6 376 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 GSTK1Q9Y2Q3 226 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 ZNF879B4DU55 563 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 C2CD2LO14523 706 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 MRASO14807 208 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 KDM4BO94953 1096 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 IFNA7P01567 189 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 NPEPPSP55786 919 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 ZNF423Q2M1K9 1284 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 PLA2G4EQ3MJ16 856 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 ENOSF1Q7L5Y1 443 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 RASAL3Q86YV0 1011 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 EPHX4Q8IUS5 362 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 LRRC47Q8N1G4 583 aaKnown RBP8.99□□□□□ -0.97
YBX3-208ENST00000540447 DHRS1Q96LJ7 313 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 MED28Q9H204 178 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 LRRC4Q9HBW1 653 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 PCDHA1Q9Y5I3 950 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 POTEMA6NI47 508 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 MYL12BO14950 172 aa8.99□□□□□ -0.97
YBX3-208ENST00000540447 OR7A10O76100 309 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms