RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 HECTD3Q5T447 861 aa16.41■□□□□ 0.22
PUDP-206ENST00000540122 SLFN12LQ6IEE8 588 aa16.41■□□□□ 0.22
PUDP-206ENST00000540122 MYCT1Q8N699 235 aa16.41■□□□□ 0.22
PUDP-206ENST00000540122 FAM84AQ96KN4 292 aa16.41■□□□□ 0.22
PUDP-206ENST00000540122 REEP2Q9BRK0 252 aa16.41■□□□□ 0.22
PUDP-206ENST00000540122 TRIM4Q9C037 500 aa16.41■□□□□ 0.22
PUDP-206ENST00000540122 MARK1Q9P0L2 795 aa16.41■□□□□ 0.22
PUDP-206ENST00000540122 WDR35Q9P2L0 1181 aa16.41■□□□□ 0.22
PUDP-206ENST00000540122 ODF2LQ9ULJ1 636 aa16.41■□□□□ 0.22
PUDP-206ENST00000540122 STYXL1Q9Y6J8 313 aa16.41■□□□□ 0.22
PUDP-206ENST00000540122 A0A1B0GTQ1 180 aa16.4■□□□□ 0.22
PUDP-206ENST00000540122 TULP1O00294 542 aaPredicted RBP16.4■□□□□ 0.22
PUDP-206ENST00000540122 ACADMP11310 421 aa16.4■□□□□ 0.22
PUDP-206ENST00000540122 TRAPPC10P48553 1259 aa16.4■□□□□ 0.22
PUDP-206ENST00000540122 ZNF132P52740 706 aa16.4■□□□□ 0.22
PUDP-206ENST00000540122 COPAP53621 1224 aa16.4■□□□□ 0.22
PUDP-206ENST00000540122 PCBP4P57723 403 aaKnown RBP16.4■□□□□ 0.22
PUDP-206ENST00000540122 ME3Q16798 604 aa16.4■□□□□ 0.22
PUDP-206ENST00000540122 HYIQ5T013 277 aa16.4■□□□□ 0.22
PUDP-206ENST00000540122 TPGS1Q6ZTW0 290 aa16.4■□□□□ 0.22
PUDP-206ENST00000540122 CSGALNACT2Q8N6G5 542 aa16.4■□□□□ 0.22
PUDP-206ENST00000540122 PDZD8Q8NEN9 1154 aa16.4■□□□□ 0.22
PUDP-206ENST00000540122 PLIN2Q99541 437 aa16.4■□□□□ 0.22
PUDP-206ENST00000540122 FOXP1Q9H334 677 aaPredicted RBP16.4■□□□□ 0.22
PUDP-206ENST00000540122 CCSER2Q9H7U1 834 aa16.4■□□□□ 0.22
PUDP-206ENST00000540122 TMEM30AQ9NV96 361 aa16.4■□□□□ 0.22
PUDP-206ENST00000540122 ITGA11Q9UKX5 1188 aa16.4■□□□□ 0.22
PUDP-206ENST00000540122 EPB41L2O43491 1005 aaKnown RBP16.39■□□□□ 0.21
PUDP-206ENST00000540122 DFNA5O60443 496 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 SYNCRIPO60506 623 aaKnown RBP16.39■□□□□ 0.21
PUDP-206ENST00000540122 GREM1O60565 184 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 KRT19P08727 400 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 PDGFRBP09619 1106 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 GLDCP23378 1020 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 YWHAQP27348 245 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 GTF2BQ00403 316 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 ENPP2Q13822 863 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 LIMS2Q7Z4I7 341 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 KRI1Q8N9T8 703 aaKnown RBP16.39■□□□□ 0.21
PUDP-206ENST00000540122 MYCBPAPQ8TBZ2 947 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 OVCA2Q8WZ82 227 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 TSC1Q92574 1164 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 FBXO32Q969P5 355 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 HIC2Q96JB3 615 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 FIZ1Q96SL8 496 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 IKZF4Q9H2S9 585 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 THAP10Q9P2Z0 257 aaPredicted RBP16.39■□□□□ 0.21
PUDP-206ENST00000540122 SIX4Q9UIU6 781 aa16.39■□□□□ 0.21
PUDP-206ENST00000540122 UBR5O95071 2799 aaPredicted RBP16.39■□□□□ 0.21
PUDP-206ENST00000540122 USP9XQ93008 2570 aaPredicted RBP16.38■□□□□ 0.21
PUDP-206ENST00000540122 FAM13AO94988 1023 aa16.38■□□□□ 0.21
PUDP-206ENST00000540122 ACSL1P33121 698 aa16.38■□□□□ 0.21
PUDP-206ENST00000540122 TUBP50607 506 aa16.38■□□□□ 0.21
PUDP-206ENST00000540122 ZNF131P52739 623 aa16.38■□□□□ 0.21
PUDP-206ENST00000540122 MDH1BQ5I0G3 518 aa16.38■□□□□ 0.21
PUDP-206ENST00000540122 HTR3DQ70Z44 454 aa16.38■□□□□ 0.21
PUDP-206ENST00000540122 DPH6Q7L8W6 267 aa16.38■□□□□ 0.21
PUDP-206ENST00000540122 ADAT2Q7Z6V5 191 aaKnown RBP16.38■□□□□ 0.21
PUDP-206ENST00000540122 CACTIN-AS1Q8N1I8 211 aa16.38■□□□□ 0.21
PUDP-206ENST00000540122 SNRNP27Q8WVK2 155 aaKnown RBP16.38■□□□□ 0.21
PUDP-206ENST00000540122 POMGNT1Q8WZA1 660 aa16.38■□□□□ 0.21
PUDP-206ENST00000540122 BIRC7Q96CA5 298 aa16.38■□□□□ 0.21
PUDP-206ENST00000540122 PARVGQ9HBI0 331 aa16.38■□□□□ 0.21
PUDP-206ENST00000540122 CHORDC1Q9UHD1 332 aaPredicted RBP16.38■□□□□ 0.21
PUDP-206ENST00000540122 NOL7Q9UMY1 257 aaKnown RBP16.38■□□□□ 0.21
PUDP-206ENST00000540122 CLCA2Q9UQC9 943 aa16.38■□□□□ 0.21
PUDP-206ENST00000540122 PTPRJQ12913 1337 aa16.38■□□□□ 0.21
PUDP-206ENST00000540122 TEX15Q9BXT5 2789 aa16.38■□□□□ 0.21
PUDP-206ENST00000540122 MYLKQ15746 1914 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 NPC1O15118 1278 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 ITGAVP06756 1048 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 CD27P26842 260 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 RBP5P82980 135 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 VAC14Q08AM6 782 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 ANKRD1Q15327 319 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 PRAMEF14Q5SWL7 426 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 SNX30Q5VWJ9 437 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 DTHD1Q6ZMT9 781 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 HS2ST1Q7LGA3 356 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 BRSK2Q8IWQ3 736 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 NUP93Q8N1F7 819 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 KCTD17Q8N5Z5 321 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 EID2Q8N6I1 236 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 DCBLD1Q8N8Z6 715 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 SAP25Q8TEE9 199 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 CACTINQ8WUQ7 758 aaKnown RBP16.37■□□□□ 0.21
PUDP-206ENST00000540122 RFFLQ8WZ73 363 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 BHMTQ93088 406 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 FAM213AQ9BRX8 229 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 NACA2Q9H009 215 aa16.37■□□□□ 0.21
PUDP-206ENST00000540122 RTN3O95197 1032 aaPredicted RBP16.36■□□□□ 0.21
PUDP-206ENST00000540122 ACO1P21399 889 aaKnown RBP16.36■□□□□ 0.21
PUDP-206ENST00000540122 ABCB4P21439 1286 aa16.36■□□□□ 0.21
PUDP-206ENST00000540122 WARSP23381 471 aaKnown RBP16.36■□□□□ 0.21
PUDP-206ENST00000540122 PRKCHP24723 683 aa16.36■□□□□ 0.21
PUDP-206ENST00000540122 ABCD1P33897 745 aa16.36■□□□□ 0.21
PUDP-206ENST00000540122 TOB1P50616 345 aaPredicted RBP16.36■□□□□ 0.21
PUDP-206ENST00000540122 CDH8P55286 799 aa16.36■□□□□ 0.21
PUDP-206ENST00000540122 C21orf59P57076 290 aa16.36■□□□□ 0.21
PUDP-206ENST00000540122 ILKQ13418 452 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms