RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.1■□□□□ 0.17
UBE3B-211ENST00000539843 RAB20Q9NX57 234 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 CLIC5Q9NZA1 410 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 MARK1Q9P0L2 795 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 STARD13Q9Y3M8 1113 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 SDK1Q7Z5N4 2213 aa16.1■□□□□ 0.17
UBE3B-211ENST00000539843 LNP1A1A4G5 178 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 C4orf47A7E2U8 309 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 KCNK5O95279 499 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 TBX18O95935 607 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 BCKDHBP21953 392 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 HOXD12P35452 270 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 DGKGP49619 791 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 NOVA1P51513 510 aaKnown RBP16.09■□□□□ 0.17
UBE3B-211ENST00000539843 KIF11P52732 1056 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 STIM1Q13586 685 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 DCAF17Q5H9S7 520 aaPredicted RBP16.09■□□□□ 0.17
UBE3B-211ENST00000539843 EMC10Q5UCC4 262 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 GPRIN1Q7Z2K8 1008 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 MIB1Q86YT6 1006 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 SYT12Q8IV01 421 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 UCMAQ8WVF2 138 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 RLN3Q8WXF3 142 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 TMEM176AQ96HP8 235 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 RXFP3Q9NSD7 469 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 EVLQ9UI08 416 aaPredicted RBP16.09■□□□□ 0.17
UBE3B-211ENST00000539843 RASAL2Q9UJF2 1139 aa16.09■□□□□ 0.17
UBE3B-211ENST00000539843 SLC16A3O15427 465 aaKnown RBP16.08■□□□□ 0.16
UBE3B-211ENST00000539843 ADAM23O75077 832 aa16.08■□□□□ 0.16
UBE3B-211ENST00000539843 RPL6Q02878 288 aaKnown RBP16.08■□□□□ 0.16
UBE3B-211ENST00000539843 BECN1Q14457 450 aa16.08■□□□□ 0.16
UBE3B-211ENST00000539843 STARD3Q14849 445 aa16.08■□□□□ 0.16
UBE3B-211ENST00000539843 TRIM61Q5EBN2 209 aa16.08■□□□□ 0.16
UBE3B-211ENST00000539843 PPP1R26Q5T8A7 1209 aaPredicted RBP16.08■□□□□ 0.16
UBE3B-211ENST00000539843 PSAPL1Q6NUJ1 521 aa16.08■□□□□ 0.16
UBE3B-211ENST00000539843 ARMCX6Q7L4S7 300 aa16.08■□□□□ 0.16
UBE3B-211ENST00000539843 PHTF2Q8N3S3 785 aa16.08■□□□□ 0.16
UBE3B-211ENST00000539843 ZNF276Q8N554 614 aa16.08■□□□□ 0.16
UBE3B-211ENST00000539843 CEP76Q8TAP6 659 aa16.08■□□□□ 0.16
UBE3B-211ENST00000539843 SLC32A1Q9H598 525 aa16.08■□□□□ 0.16
UBE3B-211ENST00000539843 ZDHHC4Q9NPG8 344 aa16.08■□□□□ 0.16
UBE3B-211ENST00000539843 CISHQ9NSE2 258 aa16.08■□□□□ 0.16
UBE3B-211ENST00000539843 HESX1Q9UBX0 185 aa16.08■□□□□ 0.16
UBE3B-211ENST00000539843 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 HHLA1C9JL84 531 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 GFRA2O00451 464 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 TM4SF5O14894 197 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 NPC1O15118 1278 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 FKBP3Q00688 224 aaKnown RBP16.07■□□□□ 0.16
UBE3B-211ENST00000539843 MESP2Q0VG99 397 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 EFEMP1Q12805 493 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 ST3GAL2Q16842 350 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 ZCWPW2Q504Y3 356 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 N4BP2L1Q5TBK1 243 aaPredicted RBP16.07■□□□□ 0.16
UBE3B-211ENST00000539843 SFTPA1Q8IWL2 248 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 TMEFF1Q8IYR6 380 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 GSDMAQ96QA5 445 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 UBXN6Q9BZV1 441 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 GOLPH3LQ9H4A5 285 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 NMUR1Q9HB89 426 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 LRRC4Q9HBW1 653 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 OLA1Q9NTK5 396 aaKnown RBP16.07■□□□□ 0.16
UBE3B-211ENST00000539843 ZDHHC9Q9Y397 364 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 KIAA1549LQ6ZVL6 1849 aa16.07■□□□□ 0.16
UBE3B-211ENST00000539843 NDUFS2O75306 463 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 CFIP05156 583 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 HNRNPLP14866 589 aaKnown RBP eCLIP16.06■□□□□ 0.16
UBE3B-211ENST00000539843 TBXAS1P24557 533 aaPredicted RBP16.06■□□□□ 0.16
UBE3B-211ENST00000539843 WASP42768 502 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 ARID5AQ03989 594 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 LRRC63Q05C16 580 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 CETN1Q12798 172 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 MAP7D1Q3KQU3 841 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 UAP1L1Q3KQV9 507 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 ZNF658Q5TYW1 1059 aaPredicted RBP16.06■□□□□ 0.16
UBE3B-211ENST00000539843 EGFLAMQ63HQ2 1017 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 ARHGAP17Q68EM7 881 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 HDDC3Q8N4P3 179 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 RNF139Q8WU17 664 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 BHMTQ93088 406 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 SMARCE1Q969G3 411 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 IPO9Q96P70 1041 aaKnown RBP16.06■□□□□ 0.16
UBE3B-211ENST00000539843 OSER1Q9NX31 292 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 CALCOCO1Q9P1Z2 691 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 NUDT5Q9UKK9 219 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 USP3Q9Y6I4 520 aa16.06■□□□□ 0.16
UBE3B-211ENST00000539843 MYO16Q9Y6X6 1858 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 MDM4O15151 490 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 STC2O76061 302 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 CD19P15391 556 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 GABRG2P18507 467 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 PMLP29590 882 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 CORO1AP31146 461 aaKnown RBP16.05■□□□□ 0.16
UBE3B-211ENST00000539843 PPP1R2P41236 205 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 PGFP49763 221 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 ZNF132P52740 706 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 BCAT1P54687 386 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 YWHAGP61981 247 aaKnown RBP eCLIP16.05■□□□□ 0.16
UBE3B-211ENST00000539843 GFPT1Q06210 699 aaPredicted RBP16.05■□□□□ 0.16
UBE3B-211ENST00000539843 PNOCQ13519 176 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms