RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 CEBPBP17676 345 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 NOS2P35228 1153 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 MATKP42679 507 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 VAV2P52735 878 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 PUS10Q3MIT2 529 aaKnown RBP16.12■□□□□ 0.17
DDB1-216ENST00000539739 DCAF6Q58WW2 860 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 C10orf120Q5SQS8 335 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 RHOT2Q8IXI1 618 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 DEFB106AQ8N104 65 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 ING5Q8WYH8 240 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 KHSRPQ92945 711 aaKnown RBP eCLIP16.12■□□□□ 0.17
DDB1-216ENST00000539739 MCEEQ96PE7 176 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 NUP85Q9BW27 656 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 POMKQ9H5K3 350 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 CCSER2Q9H7U1 834 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 RRN3Q9NYV6 651 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 UVRAGQ9P2Y5 699 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 STAP1Q9ULZ2 295 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 ADGRG1Q9Y653 693 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 MYO16Q9Y6X6 1858 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 C2orf78A6NCI8 922 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 OAS1P00973 400 aaKnown RBP16.12■□□□□ 0.17
DDB1-216ENST00000539739 CCDC175P0C221 793 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 PDGFRAP16234 1089 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 HDCP19113 662 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 AVPR1AP37288 418 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 PPP1R15BQ5SWA1 713 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 KLHDC10Q6PID8 442 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 ARHGEF26Q96DR7 871 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 GDE1Q9NZC3 331 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 DNMT3LQ9UJW3 386 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 NAALADL1Q9UQQ1 740 aa16.12■□□□□ 0.17
DDB1-216ENST00000539739 REXO2Q9Y3B8 237 aaKnown RBP16.12■□□□□ 0.17
DDB1-216ENST00000539739 C2orf16Q68DN1 1984 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 GRXCR2A6NFK2 248 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 GJB6O95452 261 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 FYNP06241 537 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 CKMP06732 381 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 SDC4P31431 198 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 RFC1P35251 1148 aaPredicted RBP16.11■□□□□ 0.17
DDB1-216ENST00000539739 FLT3P36888 993 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 EFEMP1Q12805 493 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 KIF5AQ12840 1032 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 STXBP5Q5T5C0 1151 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 CMTM8Q8IZV2 173 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 EMC1Q8N766 993 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 JOSD2Q8TAC2 188 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 ZNF564Q8TBZ8 553 aaPredicted RBP16.11■□□□□ 0.17
DDB1-216ENST00000539739 RXFP2Q8WXD0 754 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 RFFLQ8WZ73 363 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 FGF13Q92913 245 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 DDX23Q9BUQ8 820 aaKnown RBP16.11■□□□□ 0.17
DDB1-216ENST00000539739 SLC46A2Q9BY10 475 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 NUDT5Q9UKK9 219 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 CDH7Q9ULB5 785 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 ZFP37Q9Y6Q3 630 aaPredicted RBP16.11■□□□□ 0.17
DDB1-216ENST00000539739 NOTCH4Q99466 2003 aa16.11■□□□□ 0.17
DDB1-216ENST00000539739 REV3LO60673 3130 aa16.1■□□□□ 0.17
DDB1-216ENST00000539739 TMEM191CA6NGB0 347 aa16.1■□□□□ 0.17
DDB1-216ENST00000539739 C2CD4BA6NLJ0 364 aa16.1■□□□□ 0.17
DDB1-216ENST00000539739 COCHO43405 550 aa16.1■□□□□ 0.17
DDB1-216ENST00000539739 TBX18O95935 607 aa16.1■□□□□ 0.17
DDB1-216ENST00000539739 MBL2P11226 248 aaPredicted RBP16.1■□□□□ 0.17
DDB1-216ENST00000539739 GPD1P21695 349 aa16.1■□□□□ 0.17
DDB1-216ENST00000539739 GBP1P32455 592 aa16.1■□□□□ 0.17
DDB1-216ENST00000539739 GBP2P32456 591 aaPredicted RBP16.1■□□□□ 0.17
DDB1-216ENST00000539739 RPL7AP62424 266 aaKnown RBP16.1■□□□□ 0.17
DDB1-216ENST00000539739 SYPL2Q5VXT5 272 aa16.1■□□□□ 0.17
DDB1-216ENST00000539739 MSANTD2Q6P1R3 559 aa16.1■□□□□ 0.17
DDB1-216ENST00000539739 OTOP3Q7RTS5 596 aa16.1■□□□□ 0.17
DDB1-216ENST00000539739 NPAS3Q8IXF0 933 aa16.1■□□□□ 0.17
DDB1-216ENST00000539739 ARL14EPQ8N8R7 260 aaPredicted RBP16.1■□□□□ 0.17
DDB1-216ENST00000539739 SLC35G2Q8TBE7 412 aa16.1■□□□□ 0.17
DDB1-216ENST00000539739 CYP2S1Q96SQ9 504 aa16.1■□□□□ 0.17
DDB1-216ENST00000539739 TSGA10Q9BZW7 698 aa16.1■□□□□ 0.17
DDB1-216ENST00000539739 MARCH2Q9P0N8 246 aa16.1■□□□□ 0.17
DDB1-216ENST00000539739 RASAL2Q9UJF2 1139 aa16.1■□□□□ 0.17
DDB1-216ENST00000539739 A0A0A6YYK5 440 aaPredicted RBP16.09■□□□□ 0.17
DDB1-216ENST00000539739 MYO1FO00160 1098 aa16.09■□□□□ 0.17
DDB1-216ENST00000539739 NRG2O14511 850 aaPredicted RBP16.09■□□□□ 0.17
DDB1-216ENST00000539739 PJA2O43164 708 aa16.09■□□□□ 0.17
DDB1-216ENST00000539739 NOP2P46087 812 aaKnown RBP16.09■□□□□ 0.17
DDB1-216ENST00000539739 AAK1Q2M2I8 961 aa16.09■□□□□ 0.17
DDB1-216ENST00000539739 SLC25A52Q3SY17 297 aa16.09■□□□□ 0.17
DDB1-216ENST00000539739 PTCRAQ6ISU1 281 aaPredicted RBP16.09■□□□□ 0.17
DDB1-216ENST00000539739 ZNF771Q7L3S4 317 aaPredicted RBP16.09■□□□□ 0.17
DDB1-216ENST00000539739 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.09■□□□□ 0.17
DDB1-216ENST00000539739 DQX1Q8TE96 717 aaKnown RBP16.09■□□□□ 0.17
DDB1-216ENST00000539739 FNIP1Q8TF40 1166 aa16.09■□□□□ 0.17
DDB1-216ENST00000539739 ACSF2Q96CM8 615 aaPredicted RBP16.09■□□□□ 0.17
DDB1-216ENST00000539739 SERPINB11Q96P15 392 aa16.09■□□□□ 0.17
DDB1-216ENST00000539739 RNF38Q9H0F5 515 aa16.09■□□□□ 0.17
DDB1-216ENST00000539739 SMOC2Q9H3U7 446 aa16.09■□□□□ 0.17
DDB1-216ENST00000539739 OGFRQ9NZT2 677 aa16.09■□□□□ 0.17
DDB1-216ENST00000539739 LCMT1Q9UIC8 334 aa16.09■□□□□ 0.17
DDB1-216ENST00000539739 ANAPC7Q9UJX3 599 aa16.09■□□□□ 0.17
DDB1-216ENST00000539739 USTQ9Y2C2 406 aa16.09■□□□□ 0.17
DDB1-216ENST00000539739 BTNL10A8MVZ5 291 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 KRT86O43790 486 aa16.08■□□□□ 0.17
DDB1-216ENST00000539739 OLFM2O95897 454 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms