RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 PHF13Q86YI8 300 aaPredicted RBP13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 MIB1Q86YT6 1006 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 OR8K1Q8NGG5 319 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 CDK5RAP1Q96SZ6 601 aaKnown RBP13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 DNAJC7Q99615 494 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 C11orf70Q9BRQ4 267 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 OLA1Q9NTK5 396 aaKnown RBP13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 ABHD10Q9NUJ1 306 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 TAS2R14Q9NYV8 317 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 MARCH2Q9P0N8 246 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 CFAP97Q9P2B7 532 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 ARHGAP20Q9P2F6 1191 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 NAALADL1Q9UQQ1 740 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 BZW2Q9Y6E2 419 aaKnown RBP13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 COL4A3Q01955 1670 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 SLC12A8A0AV02 714 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 TMCO5BA8MYB1 307 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 AKR1B15C9JRZ8 316 aaPredicted RBP13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 GOLGA8SH3BPF8 625 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 SCAMP3O14828 347 aaKnown RBP13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 CHADO15335 359 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 DCXO43602 365 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 ADCY5O95622 1261 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 GLI1P08151 1106 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 HMBSP08397 361 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 YWHAZP63104 245 aaKnown RBP13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 ARHGAP29Q52LW3 1261 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 SYPL2Q5VXT5 272 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 MSANTD2Q6P1R3 559 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 TOGARAM2Q6ZUX3 1019 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 DDX42Q86XP3 938 aaKnown RBP eCLIP13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 DNAAF5Q86Y56 855 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 ZDHHC17Q8IUH5 632 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 UBALD2Q8IYN6 164 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 DEFB106AQ8N104 65 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 ASIC4Q96FT7 647 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 BRD9Q9H8M2 597 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 POPDC2Q9HBU9 364 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 SLC2A4RGQ9NR83 387 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 ASNSD1Q9NWL6 643 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 THG1LQ9NWX6 298 aaKnown RBP13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 ADAM22Q9P0K1 906 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 SH3BP1Q9Y3L3 701 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 WNT6Q9Y6F9 365 aa13.29□□□□□ -0.28
TSPAN9-207ENST00000539631 PI4K2BG5E9Z4 385 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 CAPN9O14815 690 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 HSF2BPO75031 334 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 DAB1O75553 588 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 RNASE9P60153 205 aaKnown RBP13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 IER5LQ5T953 404 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 FAM102AQ5T9C2 384 aaPredicted RBP13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 TRIM68Q6AZZ1 485 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 CC2D1AQ6P1N0 951 aaPredicted RBP13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 MON1BQ7L1V2 547 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 BEND5Q7L4P6 421 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 SLC26A9Q7LBE3 791 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 CNGA4Q8IV77 575 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 DRC7Q8IY82 874 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 TC2NQ8N9U0 490 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 DQX1Q8TE96 717 aaKnown RBP13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 EDAQ92838 391 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 SLC2A13Q96QE2 648 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 FAM83CQ9BQN1 747 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 TRIM62Q9BVG3 475 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 LINC00597Q9H2U6 94 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 METTL5Q9NRN9 209 aaKnown RBP13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 ADAMTS1Q9UHI8 967 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 STRIP2Q9ULQ0 834 aa13.28□□□□□ -0.28
TSPAN9-207ENST00000539631 VCANP13611 3396 aa13.27□□□□□ -0.28
TSPAN9-207ENST00000539631 E2F8A0AVK6 867 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 ARNTLO00327 626 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 MSI1O43347 362 aaKnown RBP13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 GREM1O60565 184 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 RTN2O75298 545 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 STC2O76061 302 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 GJB6O95452 261 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 CALB1P05937 261 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 GZMAP12544 262 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 ALADP13716 330 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 ARSAP15289 507 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 CDC25BP30305 580 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 SCNN1AP37088 669 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 EIF4A3P38919 411 aaKnown RBP13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 IFNAR2P48551 515 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 PITX1P78337 314 aaPredicted RBP13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 COG7P83436 770 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 C1QBPQ07021 282 aaKnown RBP13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 TNK2Q07912 1038 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 TSR1Q2NL82 804 aaKnown RBP13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 DCAF6Q58WW2 860 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 TAC4Q86UU9 113 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 MCOLN2Q8IZK6 566 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 TTC8Q8TAM2 541 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 ADAM32Q8TC27 787 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 OSCP1Q8WVF1 389 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 IRF7Q92985 503 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 CHP1Q99653 195 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 EBF3Q9H4W6 596 aa13.27□□□□□ -0.29
TSPAN9-207ENST00000539631 EPHX3Q9H6B9 360 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms