RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 BHMTQ93088 406 aa20.03■□□□□ 0.8
TNFRSF1A-212ENST00000539372 NT5C1BQ96P26 610 aa20.03■□□□□ 0.8
TNFRSF1A-212ENST00000539372 BBS2Q9BXC9 721 aa20.03■□□□□ 0.8
TNFRSF1A-212ENST00000539372 CLIC5Q9NZA1 410 aa20.03■□□□□ 0.8
TNFRSF1A-212ENST00000539372 EML5Q05BV3 1969 aa20.03■□□□□ 0.8
TNFRSF1A-212ENST00000539372 STC2O76061 302 aa20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 TYRP14679 529 aa20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 ATXN1P54253 815 aaKnown RBP20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 BCAT1P54687 386 aa20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 YWHAGP61981 247 aaKnown RBP eCLIP20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 FOXK2Q01167 660 aa20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 PAK1Q13153 545 aa20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 PLK5Q496M5 336 aa20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 C10orf76Q5T2E6 689 aa20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 TMEM270Q6UE05 265 aa20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 Q6ZNB5 142 aa20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 PPM1KQ8N3J5 372 aa20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 MDGA1Q8NFP4 955 aa20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 KAT5Q92993 513 aa20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 LOXL4Q96JB6 756 aa20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 CDK5RAP1Q96SZ6 601 aaKnown RBP20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 ULBP1Q9BZM6 244 aa20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 DNAJC17Q9NVM6 304 aaKnown RBP20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 HESX1Q9UBX0 185 aa20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 PCDHB4Q9Y5E5 795 aa20.02■□□□□ 0.8
TNFRSF1A-212ENST00000539372 SDK1Q7Z5N4 2213 aa20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 XPO1O14980 1071 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 ADAM23O75077 832 aa20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 EPN2O95208 641 aa20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 VDRP11473 427 aa20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 BST2Q10589 180 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 CAMK4Q16566 473 aa20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 EOGTQ5NDL2 527 aa20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 GRAMD4Q6IC98 578 aa20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 RSRC2Q7L4I2 434 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 ARHGAP18Q8N392 663 aa20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 ZNF276Q8N554 614 aa20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 TERB1Q8NA31 727 aa20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 TFAP2BQ92481 460 aa20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 ZC3H10Q96K80 434 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 CNOT6LQ96LI5 555 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 SRRTQ9BXP5 876 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 DUSP15Q9H1R2 295 aaPredicted RBP20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 WDR35Q9P2L0 1181 aa20.01■□□□□ 0.79
TNFRSF1A-212ENST00000539372 O00370 1275 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 PMM2O15305 246 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 CACNG3O60359 315 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 ZBED1O96006 694 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 CALCAP01258 141 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 KLKB1P03952 638 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 SDHBP21912 280 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 GBP1P32455 592 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 ADIGQ0VDE8 80 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 CETN1Q12798 172 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 HSF5Q4G112 596 aaPredicted RBP20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 PREPLQ4J6C6 727 aaPredicted RBP20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 USP39Q53GS9 565 aaKnown RBP20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 FOXR2Q6PJQ5 311 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 RRAGAQ7L523 313 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 RASSF3Q86WH2 238 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 ZNF513Q8N8E2 541 aaPredicted RBP20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 LMO3Q8TAP4 145 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 XPO6Q96QU8 1125 aaKnown RBP20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 SMOC1Q9H4F8 434 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 LRRC4Q9HBW1 653 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 PLK2Q9NYY3 685 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 MARK1Q9P0L2 795 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 MARCH2Q9P0N8 246 aa20■□□□□ 0.79
TNFRSF1A-212ENST00000539372 SLC12A8A0AV02 714 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 MED19A0JLT2 244 aaPredicted RBP19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 RNF225M0QZC1 329 aaPredicted RBP19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 GDF9O60383 454 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 ALDH1A2O94788 518 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 CORO1AP31146 461 aaKnown RBP19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 UBE2HP62256 183 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 COG7P83436 770 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 KCNH2Q12809 1159 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 SF3A2Q15428 464 aaKnown RBP19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 ELF2Q15723 593 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 PM20D1Q6GTS8 502 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 TOGARAM2Q6ZUX3 1019 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 NUDT18Q6ZVK8 323 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 BHLHA9Q7RTU4 235 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 ARHGEF19Q8IW93 802 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 TRIM59Q8IWR1 403 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 HMGB4Q8WW32 186 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 P2RY11Q96G91 374 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 IPO9Q96P70 1041 aaKnown RBP19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 BCCIPQ9P287 314 aaKnown RBP eCLIP19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 HCN2Q9UL51 889 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 KIAA1257Q9ULG3 409 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 STRIP2Q9ULQ0 834 aa19.99■□□□□ 0.79
TNFRSF1A-212ENST00000539372 TCRBV21S2A2A0A5A6 115 aa19.98■□□□□ 0.79
TNFRSF1A-212ENST00000539372 DCDC2BA2VCK2 349 aa19.98■□□□□ 0.79
TNFRSF1A-212ENST00000539372 P4HA2O15460 535 aa19.98■□□□□ 0.79
TNFRSF1A-212ENST00000539372 RHOBTB1O94844 696 aa19.98■□□□□ 0.79
TNFRSF1A-212ENST00000539372 GNA14O95837 355 aa19.98■□□□□ 0.79
TNFRSF1A-212ENST00000539372 PAEPP09466 180 aa19.98■□□□□ 0.79
TNFRSF1A-212ENST00000539372 LCP1P13796 627 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms