RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 ADCY1Q08828 1119 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 RAB41Q5JT25 222 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 VARS2Q5ST30 1063 aaKnown RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 TTC27Q6P3X3 843 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 SPOCD1Q6ZMY3 1216 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 PIGZQ86VD9 579 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 CEP57Q86XR8 500 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 CCDC13Q8IYE1 715 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 THEM5Q8N1Q8 247 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 SLC39A11Q8N1S5 342 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 SCML4Q8N228 414 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 COLGALT1Q8NBJ5 622 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 ZMIZ2Q8NF64 920 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 CMASQ8NFW8 434 aaPredicted RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 OR10T2Q8NGX3 314 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 SP7Q8TDD2 431 aaPredicted RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 RXFP2Q8WXD0 754 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 CENPIQ92674 756 aaPredicted RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 GDAP1L1Q96MZ0 367 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 ZIM3Q96PE6 472 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 VN1R3Q9BXE9 311 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 TMEM30AQ9NV96 361 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 hCG_1818297A0A087WSY0 165 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 MYBPHLA2RUH7 354 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 HHLA1C9JL84 531 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 CLDN5O00501 218 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 TTI1O43156 1089 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 CREB3O43889 395 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 BEST1O76090 585 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 TRUB2O95900 331 aaKnown RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 RALAP11233 206 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 PDGFRAP16234 1089 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 ECHS1P30084 290 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 MIPP30301 263 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 COILP38432 576 aaPredicted RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 CDKN2BP42772 138 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 ARSEP51690 589 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 DRG2P55039 364 aaKnown RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 MRPS25P82663 173 aaKnown RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 CUL1Q13616 776 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 SLMAPQ14BN4 828 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 SHHQ15465 462 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 HADHQ16836 314 aaKnown RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 SKIDA1Q1XH10 827 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 CCDC14Q49A88 953 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 ATP13A4Q4VNC1 1196 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 RTP2Q5QGT7 225 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 RNF187Q5TA31 235 aaPredicted RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 DUPD1Q68J44 220 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 DRICH1Q6PGQ1 229 aaPredicted RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 C6orf89Q6UWU4 347 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 MFSD7Q6UXD7 560 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 TAS1R1Q7RTX1 841 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 BNIPLQ7Z465 357 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 ADAT2Q7Z6V5 191 aaKnown RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 VSIG1Q86XK7 387 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 RNF168Q8IYW5 571 aaPredicted RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 FIBCD1Q8N539 461 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 CLEC4CQ8WTT0 213 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 TEKT4Q8WW24 435 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 CASKIN2Q8WXE0 1202 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 RAPGEF5Q92565 580 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 CLP1Q92989 425 aaKnown RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 ARL8AQ96BM9 186 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 SMARCD1Q96GM5 515 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 TMEM169Q96HH4 297 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 PCED1BQ96HM7 432 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 PEBP4Q96S96 227 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 CCT8L2Q96SF2 557 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 SMOQ99835 787 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 TTPALQ9BTX7 342 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 DDX23Q9BUQ8 820 aaKnown RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 DCLK3Q9C098 648 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 PNPLA8Q9NP80 782 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 AAASQ9NRG9 546 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 KRT82Q9NSB4 513 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 SPG21Q9NZD8 308 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 LCHNA4D1U4 455 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 ZNF487B1APH4 448 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 PIK3R2O00459 728 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 DAB1O75553 588 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 RNF8O76064 485 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 FBXO21O94952 628 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 KRT1P04264 644 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 PPM1AP35813 382 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 HSPA9P38646 679 aaKnown RBP9.21□□□□□ -0.94
DDB1-213ENST00000539332 CARSP49589 748 aaKnown RBP9.21□□□□□ -0.94
DDB1-213ENST00000539332 SLC8A3P57103 927 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 TSPY1Q01534 308 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 DR1Q01658 176 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 GUCY2DQ02846 1103 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 MRPL58Q14197 206 aaKnown RBP9.21□□□□□ -0.94
DDB1-213ENST00000539332 TAF5Q15542 800 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 USP41Q3LFD5 358 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 LACTB2Q53H82 288 aaPredicted RBP9.21□□□□□ -0.94
DDB1-213ENST00000539332 LRRTM3Q86VH5 581 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 JAMLQ86YT9 394 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 SCUBE3Q8IX30 993 aa9.21□□□□□ -0.94
DDB1-213ENST00000539332 TSEN2Q8NCE0 465 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms