RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.11□□□□□ -0.95
DDB1-212ENST00000538470 CLIC5Q9NZA1 410 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 DNMT3LQ9UJW3 386 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 ANGPTL2Q9UKU9 493 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 ZNF510Q9Y2H8 683 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 PCDH15Q96QU1 1955 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 LAMA1P25391 3075 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 A0A1W2PQH9 124 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 GFRA2O00451 464 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 CETN3O15182 167 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 ZNF202O95125 648 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 RALAP11233 206 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 RARGP13631 454 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 HOXB2P14652 356 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 TYRP14679 529 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 CD58P19256 250 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 PLA2G4AP47712 749 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 DHPSP49366 369 aaPredicted RBP9.1□□□□□ -0.95
DDB1-212ENST00000538470 SLC8A3P57103 927 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 SHC2P98077 582 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 LMAN2Q12907 356 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 E2F5Q15329 346 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 C10orf120Q5SQS8 335 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 PEAR1Q5VY43 1037 aaPredicted RBP9.1□□□□□ -0.95
DDB1-212ENST00000538470 ARHGAP17Q68EM7 881 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 SLC36A4Q6YBV0 504 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 Q6ZNB5 142 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 RABEPKQ7Z6M1 372 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 TMEM25Q86YD3 366 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 HMGB4Q8WW32 186 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 WBP2Q969T9 261 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 JAKMIP2Q96AA8 810 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 DUSP16Q9BY84 665 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 UBXN6Q9BZV1 441 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 DCLK3Q9C098 648 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 GOLPH3LQ9H4A5 285 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 MMRN2Q9H8L6 949 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 TMEM9BQ9NQ34 198 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 DNAJC17Q9NVM6 304 aaKnown RBP9.1□□□□□ -0.95
DDB1-212ENST00000538470 OSER1Q9NX31 292 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 NAGPAQ9UK23 515 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 MAPK8IP1Q9UQF2 711 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 USP3Q9Y6I4 520 aa9.1□□□□□ -0.95
DDB1-212ENST00000538470 ANTXRLA6NF34 631 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 NPC1O15118 1278 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 ZBTB24O43167 697 aaPredicted RBP9.09□□□□□ -0.95
DDB1-212ENST00000538470 MAP3K13O43283 966 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 AP5Z1O43299 807 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 ZNF217O75362 1048 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 KCNK5O95279 499 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 TBX18O95935 607 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 PENKP01210 267 aaPredicted RBP9.09□□□□□ -0.95
DDB1-212ENST00000538470 CSRP1P21291 193 aaKnown RBP9.09□□□□□ -0.95
DDB1-212ENST00000538470 CHKAP35790 457 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 DGKGP49619 791 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 PGFP49763 221 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 YWHAEP62258 255 aaKnown RBP9.09□□□□□ -0.95
DDB1-212ENST00000538470 COG7P83436 770 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 MAP7D1Q3KQU3 841 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 PPP1R26Q5T8A7 1209 aaPredicted RBP9.09□□□□□ -0.95
DDB1-212ENST00000538470 EMC10Q5UCC4 262 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 LYSMD4Q5XG99 296 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 EGFLAMQ63HQ2 1017 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 SDE2Q6IQ49 451 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 SYT12Q8IV01 421 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 ZC3H3Q8IXZ2 948 aaKnown RBP9.09□□□□□ -0.95
DDB1-212ENST00000538470 CHPFQ8IZ52 775 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 PGBD3Q8N328 593 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 NAT16Q8N8M0 369 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 TMEM176AQ96HP8 235 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 GSDMAQ96QA5 445 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 TSG101Q99816 390 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 GABRG3Q99928 467 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 NUSAP1Q9BXS6 441 aaKnown RBP9.09□□□□□ -0.95
DDB1-212ENST00000538470 NMUR1Q9HB89 426 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 CISHQ9NSE2 258 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 RAB20Q9NX57 234 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 STRIP2Q9ULQ0 834 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 CIZ1Q9ULV3 898 aaPredicted RBP9.09□□□□□ -0.95
DDB1-212ENST00000538470 INVSQ9Y283 1065 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 SLC27A6Q9Y2P4 619 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 ADAMTS9Q9P2N4 1935 aa9.09□□□□□ -0.95
DDB1-212ENST00000538470 MUC22E2RYF6 1773 aaPredicted RBP9.09□□□□□ -0.95
DDB1-212ENST00000538470 C4orf47A7E2U8 309 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 MDM4O15151 490 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 STC2O76061 302 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 GABRG2P18507 467 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 PPP1R2P41236 205 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 NOVA1P51513 510 aaKnown RBP9.08□□□□□ -0.96
DDB1-212ENST00000538470 ZNF132P52740 706 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 BCAT1P54687 386 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 RAD23BP54727 409 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 LRRC63Q05C16 580 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 EIF4HQ15056 248 aaKnown RBP9.08□□□□□ -0.96
DDB1-212ENST00000538470 ST3GAL2Q16842 350 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 TRIM61Q5EBN2 209 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 RAB41Q5JT25 222 aa9.08□□□□□ -0.96
DDB1-212ENST00000538470 N4BP2L1Q5TBK1 243 aaPredicted RBP9.08□□□□□ -0.96
DDB1-212ENST00000538470 ZNF658Q5TYW1 1059 aaPredicted RBP9.08□□□□□ -0.96
DDB1-212ENST00000538470 PSAPL1Q6NUJ1 521 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms