RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.13□□□□□ -0.632e-6■■□□□ 12.2
TNFRSF1A-211ENST00000538363 RASAL2Q9UJF2 1139 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TMEM59LQ9UK28 342 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 USP3Q9Y6I4 520 aa11.13□□□□□ -0.63
TNFRSF1A-211ENST00000538363 DPYSL4O14531 572 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TNFRSF10BO14763 440 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 KRT1P04264 644 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ATF6P18850 670 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 IGFBP4P22692 258 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 FLT3P36888 993 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PTPN9P43378 593 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CLCN4P51793 760 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CKAP4Q07065 602 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 EFEMP1Q12805 493 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CLUL1Q15846 466 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SLC25A52Q3SY17 297 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CCDC14Q49A88 953 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ARHGAP15Q53QZ3 475 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PPP1R15BQ5SWA1 713 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ZNF697Q5TEC3 545 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 HFE2Q6ZVN8 426 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 RTL10Q7L3V2 364 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ARCQ7LC44 396 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MAP7D3Q8IWC1 876 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MNS1Q8NEH6 495 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ADAM32Q8TC27 787 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 HDAC7Q8WUI4 952 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 HSPH1Q92598 858 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MRPS31Q92665 395 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CASP10Q92851 521 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MRPL38Q96DV4 380 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PIWIL1Q96J94 861 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TBCBQ99426 244 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CDCA3Q99618 268 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 DDX23Q9BUQ8 820 aaKnown RBP11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TRIM7Q9C029 511 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ATXN3LQ9H3M9 355 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TMEM51Q9NW97 253 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 FBXW11Q9UKB1 542 aa11.12□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PTPRDP23468 1912 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MYO16Q9Y6X6 1858 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CCDC195A0A1B0GUA6 201 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TCRBV5S1A1TA0A578 114 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SLC12A8A0AV02 714 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 DAPK3O43293 454 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PSTPIP1O43586 416 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ZMYND10O75800 440 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ZRANB2O95218 330 aaKnown RBP eCLIP11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 VNN2O95498 520 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TRUB2O95900 331 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 C1RP00736 705 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 APOEP02649 317 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 HMBSP08397 361 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 HNRNPA1P09651 372 aaKnown RBP eCLIP11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SLC2A3P11169 496 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 EPCAMP16422 314 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 GABRR2P28476 465 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MIPP30301 263 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CDC25CP30307 473 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CXCR5P32302 372 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 RDXP35241 583 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ATP5C1P36542 298 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 KPNA1P52294 538 aaPredicted RBP11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 USP46P62068 366 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 OGDHQ02218 1023 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 BOLA3Q53S33 107 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 EFHC2Q5JST6 749 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 HECTD3Q5T447 861 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SYPL2Q5VXT5 272 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 LILRA6Q6PI73 481 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PDZD4Q76G19 769 aaPredicted RBP11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 STRADAQ7RTN6 431 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SLFN11Q7Z7L1 901 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MIB1Q86YT6 1006 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 RCOR2Q8IZ40 523 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MICALL1Q8N3F8 863 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 NIPA2Q8N8Q9 360 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 LRRC57Q8N9N7 239 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 OVCA2Q8WZ82 227 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PSMG2Q969U7 264 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 RBM41Q96IZ5 413 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SERPINB11Q96P15 392 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SLC2A13Q96QE2 648 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 NAP1L3Q99457 506 aaPredicted RBP11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SLITRK6Q9H5Y7 841 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 NSUN3Q9H649 340 aaKnown RBP11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 WDCPQ9H6R7 721 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MARCH2Q9P0N8 246 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SFMBT1Q9UHJ3 866 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 NUDT5Q9UKK9 219 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 USP18Q9UMW8 372 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SNX12Q9UMY4 172 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PCDHA3Q9Y5H8 950 aa11.11□□□□□ -0.63
TNFRSF1A-211ENST00000538363 LRRD1A4D1F6 860 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ZNF197O14709 1029 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SRGAP2O75044 1071 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MBL2P11226 248 aaPredicted RBP11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CTNNA2P26232 953 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PCK1P35558 622 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms