RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 RAMP2O60895 175 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 OAZ1P54368 228 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 TLK2Q86UE8 772 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 B3GALNT2Q8NCR0 500 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 SKA1Q96BD8 255 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 IL17RAQ96F46 866 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 ATXN3LQ9H3M9 355 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 WHRNQ9P202 907 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 TIMM13Q9Y5L4 95 aaPredicted RBP17.3■□□□□ 0.36
SCARB1-205ENST00000538291 IL1R1P14778 569 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 DEFA1P59665 94 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 DEFA3P59666 94 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 TBL3Q12788 808 aaKnown RBP17.3■□□□□ 0.36
SCARB1-205ENST00000538291 PGS1Q32NB8 556 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 CENPLQ8N0S6 344 aaPredicted RBP17.3■□□□□ 0.36
SCARB1-205ENST00000538291 VMP1Q96GC9 406 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 ZCCHC2Q9C0B9 1178 aaKnown RBP17.3■□□□□ 0.36
SCARB1-205ENST00000538291 EFCAB1Q9HAE3 211 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 KBTBD4Q9NVX7 518 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 MAPTP10636 758 aaKnown RBP17.3■□□□□ 0.36
SCARB1-205ENST00000538291 NUMBP49757 651 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 CHRNB3Q05901 458 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 SV2AQ7L0J3 742 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 EMC1Q8N766 993 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 ACTR8Q9H981 624 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 CYP4F12Q9HCS2 524 aa17.3■□□□□ 0.36
SCARB1-205ENST00000538291 USP1O94782 785 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 CCDC159P0C7I6 412 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 RPS7P62081 194 aaKnown RBP17.29■□□□□ 0.36
SCARB1-205ENST00000538291 RIOX1Q9H6W3 641 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 PADI4Q9UM07 663 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 PDZK1P1A8MUH7 402 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 RNF103O00237 685 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 ZW10O43264 779 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 CSDE1O75534 798 aaKnown RBP17.29■□□□□ 0.36
SCARB1-205ENST00000538291 FGFR2P21802 821 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 HSD17B3P37058 310 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 MPP3Q13368 585 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 SPIRE2Q8WWL2 714 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 HMX1Q9NP08 348 aaPredicted RBP17.29■□□□□ 0.36
SCARB1-205ENST00000538291 UXTQ9UBK9 157 aaPredicted RBP17.29■□□□□ 0.36
SCARB1-205ENST00000538291 CTNNAL1Q9UBT7 734 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 A0A1B0GW55 424 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 RBAK-RBAKDNI3L0D1 243 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 CPSF4O95639 269 aaKnown RBP17.29■□□□□ 0.36
SCARB1-205ENST00000538291 DUX4L2P0CJ85 424 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 DUX4L3P0CJ86 424 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 DUX4L4P0CJ87 422 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 DUX4L5P0CJ88 424 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 DUX4L6P0CJ89 424 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 DUX4L7P0CJ90 424 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 CYP2F1P24903 491 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 DSG4Q86SJ6 1040 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 SMARCD1Q96GM5 515 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 AHSPQ9NZD4 102 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 DUX4Q9UBX2 424 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 TPST1O60507 370 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 PTPN3P26045 913 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 KLC1Q07866 573 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 NT5DC3Q86UY8 548 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 CCT7Q99832 543 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 ASB7Q9H672 318 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 ATP13A1Q9HD20 1204 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 VPS51Q9UID3 782 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 CEMIPQ8WUJ3 1361 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 ZMYM2Q9UBW7 1377 aa17.29■□□□□ 0.36
SCARB1-205ENST00000538291 SLCO1B7G3V0H7 640 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 ATP6AP1LQ52LC2 224 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 TRMT11Q7Z4G4 463 aaKnown RBP17.28■□□□□ 0.36
SCARB1-205ENST00000538291 EDEM1Q92611 657 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 SERPINB11Q96P15 392 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 SH3GL1Q99961 368 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 MADDQ8WXG6 1647 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 KANSL1LA0AUZ9 987 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 MAGEB16A2A368 324 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 CCT8L1PA6NM43 557 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 RTN3O95197 1032 aaPredicted RBP17.28■□□□□ 0.36
SCARB1-205ENST00000538291 YWHAQP27348 245 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 ADORA2AP29274 412 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 HSPA13P48723 471 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 SEL1L3Q68CR1 1132 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 ZDHHC17Q8IUH5 632 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 NOA1Q8NC60 698 aaKnown RBP17.28■□□□□ 0.36
SCARB1-205ENST00000538291 MIEF1Q9NQG6 463 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 NCKIPSDQ9NZQ3 722 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 F8VZ95 297 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 TFE3P19532 575 aaPredicted RBP17.28■□□□□ 0.36
SCARB1-205ENST00000538291 CCND1P24385 295 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 NFYCQ13952 458 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 ANGPT1Q15389 498 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 ERMARDQ5T6L9 678 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 ZNF410Q86VK4 478 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 ABRAQ8N0Z2 381 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 COLGALT1Q8NBJ5 622 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 ENGASEQ8NFI3 743 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 TMEM159Q96B96 161 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 TPBGLP0DKB5 382 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 CSHL1Q14406 222 aa17.28■□□□□ 0.36
SCARB1-205ENST00000538291 TRIP4Q15650 581 aaPredicted RBP17.28■□□□□ 0.36
SCARB1-205ENST00000538291 FIGNQ5HY92 759 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms