RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 CGB2Q6NT52 195 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 C16orf46Q6P387 395 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 MAMDC4Q6UXC1 1216 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 DSTYKQ6XUX3 929 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 PIGZQ86VD9 579 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 ADGRF2Q8IZF7 708 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 PDCD7Q8N8D1 485 aaKnown RBP9.03□□□□□ -0.96
UBE3B-208ENST00000538070 C2orf69Q8N8R5 385 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 GAD1Q99259 594 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 RRAGCQ9HB90 399 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 SCN1AP35498 2009 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 BEST1O76090 585 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 SRGAP2BP0DMP2 458 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 NCALDP61601 193 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 ENPEPQ07075 957 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 MGAT5Q09328 741 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 HIC1Q14526 733 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 NOMO1Q15155 1222 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 KLHL38Q2WGJ6 581 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 GNASQ5JWF2 1037 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 CXCL17Q6UXB2 119 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 PQLC3Q8N755 202 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 NIPA2Q8N8Q9 360 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 STKLD1Q8NE28 680 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 PTPN18Q99952 460 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 NOD2Q9HC29 1040 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 ARMCX1Q9P291 453 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 C2CD2Q9Y426 696 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 IQANK1A0A1B0GTG1 560 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 WDR27A2RRH5 827 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 ASMTLO95671 621 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 TKTP29401 623 aaKnown RBP9.03□□□□□ -0.96
UBE3B-208ENST00000538070 MLH1P40692 756 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 GRM5P41594 1212 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 TMPRSS15P98073 1019 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 SLC10A2Q12908 348 aaPredicted RBP9.03□□□□□ -0.96
UBE3B-208ENST00000538070 MTFR1Q15390 333 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 EML3Q32P44 896 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 OLFML1Q6UWY5 402 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 HFE2Q6ZVN8 426 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 OTOAQ7RTW8 1153 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 PID1Q7Z2X4 250 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 DNAAF3Q8N9W5 541 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 RFWD2Q8NHY2 731 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 PGBD4Q96DM1 585 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 RILPQ96NA2 401 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 KCNK16Q96T55 309 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 NRDE2Q9H7Z3 1164 aa9.03□□□□□ -0.96
UBE3B-208ENST00000538070 ATP9BO43861 1147 aa9.02□□□□□ -0.96
UBE3B-208ENST00000538070 GABBR2O75899 941 aa9.02□□□□□ -0.96
UBE3B-208ENST00000538070 POMCP01189 267 aa9.02□□□□□ -0.96
UBE3B-208ENST00000538070 TROVE2P10155 538 aaKnown RBP eCLIP9.02□□□□□ -0.96
UBE3B-208ENST00000538070 STIP1P31948 543 aaKnown RBP9.02□□□□□ -0.96
UBE3B-208ENST00000538070 TAF6P49848 677 aa9.02□□□□□ -0.96
UBE3B-208ENST00000538070 TAF1BQ53T94 588 aaPredicted RBP9.02□□□□□ -0.96
UBE3B-208ENST00000538070 RWDD4Q6NW29 188 aaKnown RBP9.02□□□□□ -0.96
UBE3B-208ENST00000538070 ARRDC4Q8NCT1 418 aa9.02□□□□□ -0.96
UBE3B-208ENST00000538070 PTPRN2Q92932 1015 aa9.02□□□□□ -0.96
UBE3B-208ENST00000538070 CELF6Q96J87 481 aaKnown RBP9.02□□□□□ -0.96
UBE3B-208ENST00000538070 FBXO6Q9NRD1 293 aaPredicted RBP9.02□□□□□ -0.96
UBE3B-208ENST00000538070 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.02□□□□□ -0.96
UBE3B-208ENST00000538070 FLRT1Q9NZU1 646 aa9.02□□□□□ -0.96
UBE3B-208ENST00000538070 PAK5Q9P286 719 aa9.02□□□□□ -0.96
UBE3B-208ENST00000538070 LGALS13Q9UHV8 139 aa9.02□□□□□ -0.96
UBE3B-208ENST00000538070 FARP1Q9Y4F1 1045 aaPredicted RBP9.02□□□□□ -0.96
UBE3B-208ENST00000538070 TRIP11Q15643 1979 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 USP17L7P0C7H9 530 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 NCAM1P13591 858 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 DARSP14868 501 aaKnown RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 NQO1P15559 274 aaKnown RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 ZNF157P51786 506 aaPredicted RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 PDE1BQ01064 536 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 SNX17Q15036 470 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 SYPL2Q5VXT5 272 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 ZNF354CQ86Y25 554 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 NDUFAF2Q8N183 169 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 PPP1R36Q96LQ0 422 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 KCTD15Q96SI1 283 aaPredicted RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 SHCBP1LQ9BZQ2 653 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 UNKQ9C0B0 810 aaKnown RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 ACSS3Q9H6R3 686 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 MANSC1Q9H8J5 431 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 SLC5A4Q9NY91 659 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 TXNDC16Q9P2K2 825 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 ZFP69BQ9UJL9 534 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 UBQLN1Q9UMX0 589 aaKnown RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 G3BP2Q9UN86 482 aaKnown RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 SMG5Q9UPR3 1016 aaKnown RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 DOCK3Q8IZD9 2030 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 STRNO43815 780 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 EZRP15311 586 aaKnown RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 TPH1P17752 444 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 IL4RP24394 825 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 PGGT1BP53609 377 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 YWHAZP63104 245 aaKnown RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 MXRA7P84157 204 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 BST2Q10589 180 aaKnown RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 DCAF4L1Q3SXM0 396 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 ANKRD20A3Q5VUR7 823 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms